Factsheet for HORVU5Hr1G060310.22

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G209600.1	Wheat	nucleus, plastid	97.07	95.99
TraesCS5B01G201900.1	Wheat	nucleus, plastid	96.85	95.34
TraesCS5A01G203200.1	Wheat	nucleus	96.85	94.92
Os09t0395300-01	Rice	nucleus	65.32	76.92
Zm00001d020384_P001	Maize	nucleus	82.43	72.33
KXG35581	Sorghum	nucleus	81.53	69.22
KRG97985	Soybean	nucleus	43.92	40.97
KRH30907	Soybean	nucleus	45.5	40.0
PGSC0003DMT400034663	Potato	nucleus	40.09	39.56
KRH74367	Soybean	nucleus	24.55	39.49
Solyc11g011770.1.1	Tomato	nucleus	40.32	38.74
HORVU6Hr1G000410.1	Barley	nucleus	28.6	38.6
HORVU7Hr1G070420.2	Barley	nucleus	13.96	37.13
Bra023254.1-P	Field mustard	nucleus	29.05	35.25
Bra033844.1-P	Field mustard	nucleus	29.95	33.93
AT1G32240.1	Thale cress	nucleus	29.05	33.25
KRH39575	Soybean	nucleus	29.05	33.08
HORVU7Hr1G107500.1	Barley	mitochondrion	4.95	29.33
HORVU5Hr1G017410.10	Barley	nucleus	22.52	29.07
HORVU4Hr1G012040.5	Barley	nucleus	22.3	26.54
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	22.07	25.52
HORVU7Hr1G107680.8	Barley	nucleus	10.59	18.01
HORVU6Hr1G064920.1	Barley	mitochondrion	9.23	17.37
HORVU0Hr1G016420.1	Barley	mitochondrion	9.23	17.37
HORVU1Hr1G052170.2	Barley	nucleus	9.91	17.19
HORVU2Hr1G095530.2	Barley	nucleus	11.26	16.67
HORVU7Hr1G107670.1	Barley	nucleus	9.23	16.53
HORVU4Hr1G082560.1	Barley	plastid	13.29	15.45
HORVU7Hr1G107630.5	Barley	mitochondrion	8.78	14.39
HORVU6Hr1G019650.5	Barley	nucleus	13.29	12.29
HORVU7Hr1G080530.3	Barley	nucleus	13.06	11.35

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EMBL:AK377103	UniProt:F2ELS5	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009987	GO:GO:0010158	GO:GO:0010229
GO:GO:0030154	EnsemblPlantsGene:HORVU5Hr1G060310	EnsemblPlants:HORVU5Hr1G060310.22	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF11	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000200906F
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2ELS5]

Coordinates

chrchr5H:-:472191682..472197357

Molecular Weight (calculated)

45500.0 Da

IEP (calculated)

7.469

GRAVY (calculated)

-0.471

Length

444 amino acids

Sequence
(BLAST)

001: MEAGSAASPD LSLHISLPST GPPTGPGGGV GGRGPAGGGG GDPWRRLNGS TASTELSLSP PADLEGAALP WRHRPSSSAA VPSAATTSAQ AALMAMPMLQ
101: PLDAGVGGAS AAPPIRGIPI YNGGGGFPFL PPAPGGGEGH HHPKVGFYSY HHPATWPSSL GSTSPSSLGP GPAPPANSFD PTAAFLSSAA HHRMLSASGR
201: LNGMLSDTLR SYGAPGGGVG MGLGGHHHHL HGAQPFGLGS RFMPKLPAKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK
301: SHLQMYRTVK STDKPAASGP TDGGSGDDDF PSAGQAGSGG DNMCPRPFPE HRSTSEGAAS SVGGDMDQSS AGNASTRWSN SSRDPWLSSN SCNMDAHRSI
401: GLSSPMENME PCRSTGSQVS NHELSSPSLE FTLGRPDWHG PDHD

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.