CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020384_P001	Maize	nucleus	87.57	90.51
HORVU5Hr1G060310.22	Barley	nucleus	69.22	81.53
TraesCS5D01G209600.1	Wheat	nucleus, plastid	69.22	80.62
TraesCS5A01G203200.1	Wheat	nucleus	69.79	80.57
TraesCS5B01G201900.1	Wheat	nucleus, plastid	69.41	80.49
Os09t0395300-01	Rice	nucleus	55.45	76.92
KXG25180	Sorghum	nucleus	46.85	51.58
KRG97985	Soybean	nucleus	37.48	41.18
KRH74367	Soybean	nucleus	21.61	40.94
KRH30907	Soybean	nucleus	39.2	40.59
PGSC0003DMT400034663	Potato	nucleus	33.46	38.89
Solyc11g011770.1.1	Tomato	nucleus	34.03	38.53
Bra023254.1-P	Field mustard	nucleus	25.43	36.34
Bra033844.1-P	Field mustard	nucleus	26.77	35.71
EES13398	Sorghum	nucleus	25.24	35.11
AT1G32240.1	Thale cress	nucleus	26.0	35.05
KRH39575	Soybean	nucleus	26.0	34.87
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	20.65	29.19
EER93393	Sorghum	mitochondrion, plastid	18.93	25.92
EER91215	Sorghum	nucleus	18.74	22.95
OQU79478	Sorghum	nucleus	18.74	21.21
OQU76857	Sorghum	nucleus	9.18	18.75
EES09087	Sorghum	nucleus	11.66	16.8
EES15503	Sorghum	nucleus	11.47	16.39
EES11274	Sorghum	nucleus	9.37	15.71
KXG31083	Sorghum	nucleus	9.56	15.62
KXG40258	Sorghum	nucleus	10.32	13.3
OQU76531	Sorghum	nucleus	12.43	12.7
EES04827	Sorghum	nucleus	12.24	12.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A1B6QCF3	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009791	GO:GO:0009987	GO:GO:0010158	GO:GO:0010229	GO:GO:0030154
InterPro:Homeobox-like_sf	EnsemblPlants:KXG35581	ProteinID:KXG35581	ProteinID:KXG35581.1	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF11	InterPro:SANT/Myb	EnsemblPlantsGene:SORBI_3002G194400	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI00081ADC3F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:58125009..58133085

Molecular Weight (calculated)

53231.8 Da

IEP (calculated)

7.730

GRAVY (calculated)

-0.518

Length

523 amino acids

Sequence
(BLAST)

001: MKRGGGGTTG WEQPQACDQE RGASVAAEGR RRAMEAASPD LSLHISLPSS ASGPGPSGGG RAAVGGAGGG GGGGAGGGDP WRRLNGSTAS TELSLSPPAE
101: QEHADALPWR HRPSAAAAAA VSSSAATTSV GGAALMMPAA MPMPMLQPLD GGGGLAGSGG GGASVAPPIR GIPIYSGPGG FPFLPPATGA DGGPLHHHHQ
201: QQQQQKLGFY GSYHPSTWPS SLGSTSPSPS PLAPGTPPPS TLDPASAFLS SPAAHHHHHR MLSASGRLNG MLTDTLRGYG GSGVVGGLGG IVGGHHHHHH
301: HLHGAQPFGL GSRFMPKLPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKSTDKPAAS SGGNDGGSGD
401: EDFPGAGQAA SGGENNMCVR TFGEHHQRST SEGAASSVGG GGGDMDQSSA GNTSTRWSNS SRDPWLSSNS CNMDAHRLAG LSSPIENAEP CRSSSSQVSN
501: HELSSPSLEF TLGRPDWQGT DHD

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.