CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017702_P001	Maize	peroxisome	82.7	80.53
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	80.54	79.47
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	67.57	70.42
TraesCS6B01G293700.1	Wheat	nucleus	67.3	70.14
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	66.49	68.91
Os02t0696900-00	Rice	plasma membrane	64.32	64.5
VIT_16s0039g01900.t01	Wine grape	nucleus	30.54	34.98
KRH74367	Soybean	nucleus	25.95	34.78
CDX84102	Canola	nucleus	24.86	33.95
GSMUA_AchrUn_...	Banana	nucleus	27.84	31.69
KRH39575	Soybean	nucleus	32.7	31.03
Bra023254.1-P	Field mustard	nucleus	30.0	30.33
EES13398	Sorghum	nucleus	30.27	29.79
AT1G32240.1	Thale cress	nucleus	30.81	29.38
Bra033844.1-P	Field mustard	nucleus	30.54	28.83
GSMUA_Achr8P30770_001	Banana	nucleus	26.22	27.32
EER93393	Sorghum	mitochondrion, plastid	28.11	27.23
PGSC0003DMT400034663	Potato	nucleus	30.27	24.89
Solyc11g011770.1.1	Tomato	nucleus	30.54	24.46
KRG97985	Soybean	nucleus	30.54	23.74
EER91215	Sorghum	nucleus	27.3	23.65
KRH30907	Soybean	nucleus	30.81	22.57
KXG25180	Sorghum	nucleus	27.84	21.68
OQU79478	Sorghum	nucleus	25.95	20.78
KXG35581	Sorghum	nucleus	29.19	20.65
OQU76857	Sorghum	nucleus	13.24	19.14
EES09087	Sorghum	nucleus	15.14	15.43
KXG31083	Sorghum	nucleus	12.97	15.0
EES11274	Sorghum	nucleus	12.43	14.74
EES15503	Sorghum	nucleus	14.32	14.48
OQU76531	Sorghum	nucleus	17.03	12.3
KXG40258	Sorghum	nucleus	12.16	11.08
EES04827	Sorghum	nucleus	14.05	9.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A194YS04	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	EnsemblPlants:KXG30956	ProteinID:KXG30956	ProteinID:KXG30956.1	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF12	InterPro:SANT/Myb	EnsemblPlantsGene:SORBI_3004G273000	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI0007F1C81D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:61671482..61677115

Molecular Weight (calculated)

39241.1 Da

IEP (calculated)

8.842

GRAVY (calculated)

-0.354

Length

370 amino acids

Sequence
(BLAST)

001: MELFPAHPDL QLQISPPPAT KPMELGFWKR ALDTTSPATT TAAAAAAAAT ATTAPASLAF ASSAPTTAVG YHAAVAAAGA HQHHHQVPTS SHSHLALPFL
101: HHTQPILPEG GAGGGLRRDL TSMRPIRGIP VYNTSQPLPF LQSHHHHHHP HCYDAIGGHA AAGPRSPKAA LRLAGAPAKR GARAPRMRWT TSLHARFVHA
201: VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTIK TTDHKPASAS SYGQAAAKAI IDIPDDNLFD LTNTTSGSES SAQHSNPDGG NEHGSSMCAL
301: WCSSSISSKG AWFHDKSRDA TPGDIKSFED VQSQSLDDVV SDLNSSSPFH VAGMFGRGKK PNLDFTLGRI

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.