Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d017563_P002 | Maize | nucleus | 85.94 | 79.48 |
EES11274 | Sorghum | nucleus | 42.5 | 43.59 |
OQU76857 | Sorghum | nucleus | 21.25 | 26.56 |
HORVU0Hr1G016420.1 | Barley | mitochondrion | 17.19 | 23.31 |
HORVU6Hr1G064920.1 | Barley | mitochondrion | 17.19 | 23.31 |
TraesCS6D01G236000.1 | Wheat | mitochondrion | 21.56 | 22.7 |
TraesCS6A01G254700.1 | Wheat | nucleus | 20.31 | 21.45 |
TraesCS6B01G270800.1 | Wheat | nucleus | 20.31 | 20.44 |
KXG40258 | Sorghum | nucleus | 23.12 | 18.23 |
EES09087 | Sorghum | nucleus | 20.31 | 17.91 |
EES15503 | Sorghum | nucleus | 20.0 | 17.49 |
OQU76531 | Sorghum | nucleus | 22.5 | 14.06 |
EER91215 | Sorghum | nucleus | 18.75 | 14.05 |
EES04827 | Sorghum | nucleus | 22.81 | 13.75 |
EES13398 | Sorghum | nucleus | 15.31 | 13.03 |
KXG30956 | Sorghum | cytosol, nucleus, peroxisome, plastid | 15.0 | 12.97 |
EER93393 | Sorghum | mitochondrion, plastid | 14.06 | 11.78 |
OQU79478 | Sorghum | nucleus | 15.62 | 10.82 |
KXG25180 | Sorghum | nucleus | 15.62 | 10.53 |
KXG35581 | Sorghum | nucleus | 15.62 | 9.56 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.3 | UniProt:A0A194YS67 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KXG31083 | ProteinID:KXG31083 | ProteinID:KXG31083.2 | InterPro:Myb_dom |
InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF6 | InterPro:SANT/Myb |
EnsemblPlantsGene:SORBI_3004G285300 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0003C6D7C3 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:62780886..62783642
Molecular Weight (calculated)
34542.1 Da
IEP (calculated)
11.189
GRAVY (calculated)
-0.568
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAAGGGRN GAATRRYNRS KVPRLRWTSE LHRNFVRAVD CLGGQDKATP KLILQLMGVR GLTIAHVKSH LQMYRSSGHD IRKREMQPRL RHLKHSFTID
101: EGGPKEFICP PMKRAEAAGP EAAATATATH ESMQGNSDMG APGTRRCGDD YTRAIPMGSS RRITEGLGGW QQWQRDAAAR AATAASTLRE LGFWVRGTEE
201: PFKVRQTGRP IANRHSPVAR QLSSKEIKGE NGRFLCGTAA ATRDEAAARR RSPSSRPPAS SIDPKAVAAV SWWPSEEGGC VLPPLSSSTS LSACSGPSGS
301: CIFARQRRVN LDLSLSICGS
101: EGGPKEFICP PMKRAEAAGP EAAATATATH ESMQGNSDMG APGTRRCGDD YTRAIPMGSS RRITEGLGGW QQWQRDAAAR AATAASTLRE LGFWVRGTEE
201: PFKVRQTGRP IANRHSPVAR QLSSKEIKGE NGRFLCGTAA ATRDEAAARR RSPSSRPPAS SIDPKAVAAV SWWPSEEGGC VLPPLSSSTS LSACSGPSGS
301: CIFARQRRVN LDLSLSICGS
001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.