CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15503	Sorghum	nucleus	88.71	87.98
Zm00001d005087_P001	Maize	nucleus	55.92	58.33
TraesCS5A01G153000.1	Wheat	nucleus	45.45	50.61
TraesCS5D01G158300.1	Wheat	nucleus	44.9	50.31
TraesCS4D01G131500.1	Wheat	nucleus	45.73	48.68
TraesCS5B01G151800.1	Wheat	nucleus	45.18	48.66
VIT_08s0058g00250.t01	Wine grape	nucleus	15.43	48.28
TraesCS4A01G180900.1	Wheat	nucleus	45.18	48.09
TraesCS4B01G136900.1	Wheat	nucleus	43.8	46.9
Solyc09g005030.1.1	Tomato	nucleus	17.63	43.84
Os11t0106100-00	Rice	nucleus	23.97	40.85
VIT_06s0004g07000.t01	Wine grape	nucleus	19.01	38.98
Os12t0105600-01	Rice	nucleus	28.37	32.8
GSMUA_Achr7P22410_001	Banana	nucleus	28.1	30.72
Solyc10g076460.1.1	Tomato	nucleus	24.79	29.8
Solyc06g051060.2.1	Tomato	nucleus	20.66	29.53
PGSC0003DMT400041071	Potato	nucleus	24.52	29.47
KRH65638	Soybean	nucleus	25.9	27.17
KRH75999	Soybean	nucleus	25.62	27.11
PGSC0003DMT400068508	Potato	nucleus	24.24	26.91
KRH49433	Soybean	nucleus	27.0	26.78
Bra000180.1-P	Field mustard	nucleus	28.65	26.74
CDY07612	Canola	nucleus	28.65	26.53
CDY52431	Canola	nucleus	28.37	26.48
KRH00305	Soybean	nucleus	26.45	26.02
CDX74803	Canola	nucleus	27.0	25.52
PGSC0003DMT400077217	Potato	nucleus	26.72	25.46
CDY18860	Canola	nucleus	28.1	25.06
Bra004973.1-P	Field mustard	nucleus	27.82	24.82
CDY07070	Canola	nucleus	28.37	24.76
CDX93206	Canola	nucleus	27.82	24.16
AT2G40260.1	Thale cress	nucleus	27.27	24.15
VIT_13s0067g01500.t01	Wine grape	extracellular, vacuole	29.48	22.81
OQU76857	Sorghum	nucleus	15.7	22.27
KXG31083	Sorghum	nucleus	17.91	20.31
EES11274	Sorghum	nucleus	17.36	20.19
EES04827	Sorghum	nucleus	28.65	19.59
OQU76531	Sorghum	nucleus	26.72	18.95
KXG40258	Sorghum	nucleus	17.91	16.01
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	15.43	15.14
EES13398	Sorghum	nucleus	15.15	14.63
Bra017021.1-P	Field mustard	nucleus	14.05	14.01
EER91215	Sorghum	nucleus	15.98	13.58
EER93393	Sorghum	mitochondrion, plastid	14.05	13.35
OQU79478	Sorghum	nucleus	16.8	13.2
KXG25180	Sorghum	nucleus	16.8	12.84
KXG35581	Sorghum	nucleus	16.8	11.66

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	UniProt:C5Y2Z4	EnsemblPlants:EES09087	ProteinID:EES09087	ProteinID:EES09087.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	InterPro:SANT/Myb
EnsemblPlantsGene:SORBI_3005G004000	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0001A868D9	RefSeq:XP_002450099.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:321549..323788

Molecular Weight (calculated)

39784.9 Da

IEP (calculated)

6.968

GRAVY (calculated)

-0.788

Length

363 amino acids

Sequence
(BLAST)

001: MAGGSKGCDE SSADHQLLLS SGQAGDDGED DAGGADDVPP AGRHDGSSSN SSTVELDEAG GDSGRKVAGA SPSSVRPYVR SKNPRLRWTP ELHLCFLRAV
101: DRLGGQDRAT PKLVLQLMDV KGLSIGHVKS HLQMYRSKKI DDSDQGATGS WRDLHHQLQD GGQAYNLGHL SFHHGQTGAS TILSARFGAW PHWSNFHDPS
201: YLLHSHHLLG SKHYYSSTAE ADVFLRNRAQ YTARATSNTP ASTTLQRCLN DQFMNHHQRR LSQNEDNIHH DPLDLELALD IGPSQDKRIK RSSGCSWRRH
301: QEEENVGNQE VESATDDTRL SLSLFPSPPY VRTSSGGHHK VLGLNMEKGT AHPTRTSTLD LTI

Best Arabidopsis Sequence Match ( AT2G40260.1 )
(BLAST)

001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.