Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046174_P001 | Maize | nucleus | 78.91 | 76.08 |
| Zm00001d037015_P001 | Maize | nucleus | 77.73 | 71.84 |
| Os06t0543200-01 | Rice | nucleus | 65.43 | 61.69 |
| TraesCS7D01G334100.1 | Wheat | nucleus | 58.98 | 58.41 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 59.18 | 57.82 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 57.03 | 57.14 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 53.52 | 53.0 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 19.34 | 40.91 |
| EES04827 | Sorghum | nucleus | 37.3 | 35.97 |
| AT2G42660.1 | Thale cress | nucleus | 16.41 | 32.94 |
| PGSC0003DMT400011207 | Potato | nucleus | 14.84 | 32.07 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 23.63 | 32.01 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 18.16 | 30.29 |
| KRH11029 | Soybean | nucleus | 20.9 | 29.32 |
| PGSC0003DMT400026419 | Potato | nucleus | 19.92 | 29.31 |
| CDY42825 | Canola | nucleus | 18.55 | 29.05 |
| KRH21258 | Soybean | nucleus | 21.09 | 28.95 |
| CDY67147 | Canola | nucleus | 18.36 | 28.75 |
| Solyc02g076670.2.1 | Tomato | nucleus | 18.95 | 28.7 |
| EES15503 | Sorghum | nucleus | 19.14 | 26.78 |
| EES09087 | Sorghum | nucleus | 18.95 | 26.72 |
| KRH22274 | Soybean | nucleus | 19.14 | 26.56 |
| KRH27060 | Soybean | nucleus | 18.95 | 26.36 |
| OQU76857 | Sorghum | nucleus | 12.7 | 25.39 |
| KRH58975 | Soybean | nucleus | 19.53 | 24.94 |
| KRH42874 | Soybean | nucleus | 19.53 | 24.88 |
| Bra000270.1-P | Field mustard | nucleus | 12.89 | 22.92 |
| KXG31083 | Sorghum | nucleus | 14.06 | 22.5 |
| EES11274 | Sorghum | nucleus | 13.28 | 21.79 |
| KXG40258 | Sorghum | nucleus | 14.26 | 17.98 |
| KXG30956 | Sorghum | cytosol, nucleus, peroxisome, plastid | 12.3 | 17.03 |
| EER93393 | Sorghum | mitochondrion, plastid | 12.3 | 16.49 |
| EES13398 | Sorghum | nucleus | 11.72 | 15.96 |
| EER91215 | Sorghum | nucleus | 12.89 | 15.46 |
| OQU79478 | Sorghum | nucleus | 12.89 | 14.29 |
| KXG25180 | Sorghum | nucleus | 12.3 | 13.26 |
| KXG35581 | Sorghum | nucleus | 12.7 | 12.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | UniProt:A0A194YJL0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | ProteinID:KXG20138.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlants:OQU76531 |
| ProteinID:OQU76531 | ProteinID:OQU76531.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF42 |
| InterPro:SANT/Myb | EnsemblPlantsGene:SORBI_3010G160900 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0007F31BF8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:47356820..47362831
Molecular Weight (calculated)
55133.2 Da
IEP (calculated)
6.743
GRAVY (calculated)
-0.687
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVKQKVAT EEDMLEEDDE KRSLDNSVPP LILDLNEGFG EGSEEGEAGD DGDGNEEDGD DGGSTSEVEG GRSSSNNSSS TNHTSMSNKY CDMDSNSKGE
101: GSGERALTVR QYNRSKLPRL RWTPDLHMAF VHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKLDHESGG HERAAISSVF SPMDFHMMRR
201: GDHRFHDMLL HRAAGSVISS GRLLHNAVSP EASRLYALLQ RRQQPSMQTF DFKNYSSNLR DQEWSFSQHA AAAAAVAARA GAINNHGPTK GLIHDMILRK
301: NGRPTSHLFD VRDAIASNRT SSDAAGAAAN HGGGRVVRST DWDGTSSGPP LSRTMSAAAS TGVALGGSHH QSRGRVANLT SSSDPVVTSE ALGSRLQTLL
401: EPRTTKRMKT PMEGNGGTPD LQLSLSPNDD MGGDADKQVK KRKFLGIELS EQEVDDSGKT TLPLSLSLSL RGGEWSSEDA GSLEVAARSS GKKKAALGRS
501: TLDLTMSIKA LE
101: GSGERALTVR QYNRSKLPRL RWTPDLHMAF VHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKLDHESGG HERAAISSVF SPMDFHMMRR
201: GDHRFHDMLL HRAAGSVISS GRLLHNAVSP EASRLYALLQ RRQQPSMQTF DFKNYSSNLR DQEWSFSQHA AAAAAVAARA GAINNHGPTK GLIHDMILRK
301: NGRPTSHLFD VRDAIASNRT SSDAAGAAAN HGGGRVVRST DWDGTSSGPP LSRTMSAAAS TGVALGGSHH QSRGRVANLT SSSDPVVTSE ALGSRLQTLL
401: EPRTTKRMKT PMEGNGGTPD LQLSLSPNDD MGGDADKQVK KRKFLGIELS EQEVDDSGKT TLPLSLSLSL RGGEWSSEDA GSLEVAARSS GKKKAALGRS
501: TLDLTMSIKA LE
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.