Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76531 | Sorghum | nucleus | 61.69 | 65.43 |
| TraesCS7D01G334100.1 | Wheat | nucleus | 62.06 | 65.18 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 62.25 | 64.5 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 60.22 | 63.99 |
| Zm00001d046174_P001 | Maize | nucleus | 58.56 | 59.89 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 55.25 | 58.03 |
| Zm00001d037015_P001 | Maize | nucleus | 58.01 | 56.86 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 17.86 | 40.08 |
| Os02t0241200-00 | Rice | nucleus | 39.04 | 38.9 |
| Os11t0106100-00 | Rice | nucleus | 14.55 | 37.09 |
| PGSC0003DMT400011207 | Potato | nucleus | 15.47 | 35.44 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 24.31 | 34.92 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 18.6 | 32.9 |
| AT2G42660.1 | Thale cress | nucleus | 14.92 | 31.76 |
| KRH11029 | Soybean | nucleus | 20.81 | 30.96 |
| PGSC0003DMT400026419 | Potato | nucleus | 19.52 | 30.46 |
| KRH21258 | Soybean | nucleus | 20.81 | 30.29 |
| Solyc02g076670.2.1 | Tomato | nucleus | 18.6 | 29.88 |
| CDY67147 | Canola | nucleus | 17.31 | 28.75 |
| CDY42825 | Canola | nucleus | 17.31 | 28.75 |
| KRH22274 | Soybean | nucleus | 19.34 | 28.46 |
| KRH27060 | Soybean | nucleus | 19.15 | 28.26 |
| Os12t0105600-01 | Rice | nucleus | 15.84 | 27.39 |
| KRH42874 | Soybean | nucleus | 19.89 | 26.87 |
| KRH58975 | Soybean | nucleus | 19.71 | 26.68 |
| Os06t0670300-01 | Rice | nucleus | 11.97 | 25.39 |
| Os04t0566600-01 | Rice | extracellular | 14.18 | 25.16 |
| Bra000270.1-P | Field mustard | nucleus | 12.15 | 22.92 |
| Os03t0624000-00 | Rice | nucleus | 6.26 | 18.68 |
| Os03t0766500-01 | Rice | mitochondrion | 12.89 | 17.86 |
| Os08t0160300-00 | Rice | nucleus | 10.68 | 16.81 |
| Os02t0696900-00 | Rice | plasma membrane | 11.23 | 16.53 |
| Os09t0395300-01 | Rice | nucleus | 11.05 | 15.92 |
| Os08t0426866-00 | Rice | nucleus | 11.97 | 13.89 |
| Os12t0591600-01 | Rice | nucleus | 3.5 | 9.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:4341235 | EMBL:AK073606 | ProteinID:BAD54297.1 | ProteinID:BAF19724.1 |
| ProteinID:BAS98137.1 | ProteinID:EAZ37279.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlantsGene:Os06g0543200 | EnsemblPlants:Os06t0543200-01 | PFAM:PF00249 |
| PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF42 | UniProt:Q5Z6X2 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0000446FDE | RefSeq:XP_015641453.1 | SEG:seg | : | : |
Description
Similar to CDPK substrate protein 1. (Os06t0543200-01)
Coordinates
chr6:-:20454402..20457003
Molecular Weight (calculated)
58323.3 Da
IEP (calculated)
6.211
GRAVY (calculated)
-0.719
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVKENEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEGF GEGSEEGGVG EDGDEEDDDE DDDDDDDDDG GSTSEVAGGG RSSSNNSSTN HNSGSDKDHD
101: MNSSSSKADG GGDRVPTVRQ YNRSKLPRLR WTPDLHMAFV HAVERLGGQE RATPKLVLQM MNVRGLSIAH VKSHLQMYRS KKLDHESGHE RGAISSVFSP
201: MEFHMRRGDH RFHHHDMFFQ RAAAAGVSPF SSRMLHENGG GFFASRNPGL PESSRLYGLF QRRQQAPMQK FDFKNCNSFS RNQEWAFNQQ HAAARAAGAV
301: NGHGPAKGLI HEMIFRKEGK PTSHLFDVRD AIASTRVTSA TTAAAADHRL DGAGKAGNFD WIGSSSSRPL TRTMSAAAAA TMGDHHHLRW RGGAAGSGNT
401: TASSDPVVAS EAALGSLLER AKTKATEAMR LETPVKMTAA AVAAEEINGR TPDLQLSLSP NAGDHRSAGE KRKFLSEQEV DSDKQQLPLT LSLSLRGGGD
501: NGGGGGAEAA GRLEEEMTGS SSSKKAALGL STLDLTMSIK ALE
101: MNSSSSKADG GGDRVPTVRQ YNRSKLPRLR WTPDLHMAFV HAVERLGGQE RATPKLVLQM MNVRGLSIAH VKSHLQMYRS KKLDHESGHE RGAISSVFSP
201: MEFHMRRGDH RFHHHDMFFQ RAAAAGVSPF SSRMLHENGG GFFASRNPGL PESSRLYGLF QRRQQAPMQK FDFKNCNSFS RNQEWAFNQQ HAAARAAGAV
301: NGHGPAKGLI HEMIFRKEGK PTSHLFDVRD AIASTRVTSA TTAAAADHRL DGAGKAGNFD WIGSSSSRPL TRTMSAAAAA TMGDHHHLRW RGGAAGSGNT
401: TASSDPVVAS EAALGSLLER AKTKATEAMR LETPVKMTAA AVAAEEINGR TPDLQLSLSP NAGDHRSAGE KRKFLSEQEV DSDKQQLPLT LSLSLRGGGD
501: NGGGGGAEAA GRLEEEMTGS SSSKKAALGL STLDLTMSIK ALE
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.