Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G334100.1 | Wheat | nucleus | 94.85 | 96.13 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 88.74 | 91.0 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 82.06 | 83.17 |
| Os06t0543200-01 | Rice | nucleus | 64.5 | 62.25 |
| OQU76531 | Sorghum | nucleus | 57.82 | 59.18 |
| Zm00001d046174_P001 | Maize | nucleus | 54.58 | 53.86 |
| Zm00001d037015_P001 | Maize | nucleus | 53.63 | 50.72 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 36.26 | 35.98 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 15.84 | 34.3 |
| PGSC0003DMT400011207 | Potato | nucleus | 14.5 | 32.07 |
| AT2G42660.1 | Thale cress | nucleus | 15.08 | 30.98 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 22.33 | 30.95 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 17.37 | 29.64 |
| KRH11029 | Soybean | nucleus | 20.23 | 29.04 |
| KRH21258 | Soybean | nucleus | 20.42 | 28.69 |
| CDY42825 | Canola | nucleus | 17.75 | 28.44 |
| PGSC0003DMT400026419 | Potato | nucleus | 18.51 | 27.87 |
| CDY67147 | Canola | nucleus | 17.37 | 27.83 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 13.17 | 27.6 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 17.75 | 27.6 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 12.6 | 26.94 |
| Solyc02g076670.2.1 | Tomato | nucleus | 17.37 | 26.92 |
| KRH27060 | Soybean | nucleus | 18.32 | 26.09 |
| KRH22274 | Soybean | nucleus | 18.13 | 25.75 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 11.64 | 25.42 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 16.41 | 25.37 |
| TraesCS2B01G420900.1 | Wheat | mitochondrion, nucleus | 14.12 | 25.26 |
| KRH58975 | Soybean | nucleus | 18.89 | 24.69 |
| KRH42874 | Soybean | nucleus | 18.89 | 24.63 |
| TraesCS1B01G216600.1 | Wheat | nucleus | 14.5 | 21.59 |
| Bra000270.1-P | Field mustard | nucleus | 11.83 | 21.53 |
| TraesCS4B01G323600.1 | Wheat | nucleus | 15.46 | 21.15 |
| TraesCS6B01G270800.1 | Wheat | nucleus | 12.4 | 20.44 |
| TraesCS6B01G012800.1 | Wheat | nucleus | 11.83 | 18.62 |
| TraesCS7B01G200700.1 | Wheat | nucleus, plastid | 12.02 | 18.16 |
| TraesCS5B01G068000.1 | Wheat | nucleus | 11.83 | 17.97 |
| TraesCS4B01G072500.1 | Wheat | nucleus | 12.02 | 16.98 |
| TraesCS5B01G407600.1 | Wheat | plastid | 12.02 | 16.54 |
| TraesCS6B01G293700.1 | Wheat | nucleus | 11.07 | 16.34 |
| TraesCS5B01G201900.1 | Wheat | nucleus, plastid | 11.07 | 12.86 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF42 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | EnsemblPlantsGene:TraesCS7B01G238000 |
| EnsemblPlants:TraesCS7B01G238000.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:443343567..443345706
Molecular Weight (calculated)
56201.1 Da
IEP (calculated)
8.192
GRAVY (calculated)
-0.778
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVKEKEAL AEILEDHRKG SSDDTLPPAG LDLNEGFSEA SDDGRDGDEN YDDDGGSTSE VAGGGRSSSN NNSTNHESES SRGRHDKAEG SGERVPTVRQ
101: YNRSKHPRLR WTPDLHMAFL HAVERLGGQE RATPKLVLQM MNVRGLNIAH VKSHLQMYRS KKIEHESSHE RAAMSSVFSP MNFHMRRGDH PFHDMFFQQR
201: AAGSTLTSRF NDGGVFTPRN AGFPDASRIY GLLQCRQPPL QTFDFKNSTS LRNQEWAFTQ HAAAARARAV NDNGPGKGLI HEMIFRKDGK PTSHLFDVRD
301: AAASSGTTSP STTTTTTSQA DRRPDGAKMG SMNWIGSSSR PLSKTMSATG LEQGGHAQLP FRWRGAAGSN GCHPNGNTGR TTSSSDPVVT CEAGSPLLLP
401: KQGVPRTPAK ATEETSIGAD ARKTKASAAA EENGWAPELQ LSLSPNAAAD TAGRGKKRNS AGQEVSSDKV PLSLSLSLHG GVVDDDDGGG RDGRRLEVAT
501: GSSSKKAALG LSTLDLTMSI KTLE
101: YNRSKHPRLR WTPDLHMAFL HAVERLGGQE RATPKLVLQM MNVRGLNIAH VKSHLQMYRS KKIEHESSHE RAAMSSVFSP MNFHMRRGDH PFHDMFFQQR
201: AAGSTLTSRF NDGGVFTPRN AGFPDASRIY GLLQCRQPPL QTFDFKNSTS LRNQEWAFTQ HAAAARARAV NDNGPGKGLI HEMIFRKDGK PTSHLFDVRD
301: AAASSGTTSP STTTTTTSQA DRRPDGAKMG SMNWIGSSSR PLSKTMSATG LEQGGHAQLP FRWRGAAGSN GCHPNGNTGR TTSSSDPVVT CEAGSPLLLP
401: KQGVPRTPAK ATEETSIGAD ARKTKASAAA EENGWAPELQ LSLSPNAAAD TAGRGKKRNS AGQEVSSDKV PLSLSLSLHG GVVDDDDGGG RDGRRLEVAT
501: GSSSKKAALG LSTLDLTMSI KTLE
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.