Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 81.86 | 63.19 |
| PGSC0003DMT400026419 | Potato | nucleus | 54.85 | 37.36 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 35.02 | 34.3 |
| AT2G42660.1 | Thale cress | nucleus | 28.69 | 26.67 |
| KRH11029 | Soybean | nucleus | 40.93 | 26.58 |
| KRH21258 | Soybean | nucleus | 41.35 | 26.27 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 16.88 | 25.32 |
| KRH58975 | Soybean | nucleus | 40.08 | 23.69 |
| KRH42874 | Soybean | nucleus | 40.08 | 23.63 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 33.76 | 21.16 |
| CDY42825 | Canola | nucleus | 28.69 | 20.8 |
| CDY67147 | Canola | nucleus | 28.27 | 20.49 |
| KRH27060 | Soybean | nucleus | 31.65 | 20.38 |
| PGSC0003DMT400068508 | Potato | nucleus | 27.85 | 20.18 |
| KRH22274 | Soybean | nucleus | 31.22 | 20.05 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 34.6 | 20.0 |
| PGSC0003DMT400041071 | Potato | nucleus | 25.32 | 19.87 |
| PGSC0003DMT400075668 | Potato | nucleus | 24.89 | 19.16 |
| PGSC0003DMT400038366 | Potato | nucleus | 20.25 | 18.6 |
| PGSC0003DMT400002410 | Potato | nucleus | 16.88 | 18.52 |
| PGSC0003DMT400077217 | Potato | nucleus | 29.54 | 18.37 |
| PGSC0003DMT400030518 | Potato | nucleus | 23.21 | 17.86 |
| TraesCS6D01G098200.1 | Wheat | nucleus | 32.91 | 16.42 |
| TraesCS6A01G109700.1 | Wheat | nucleus | 32.91 | 16.35 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 32.91 | 16.25 |
| GSMUA_Achr10P... | Banana | nucleus | 35.02 | 16.02 |
| Os06t0543200-01 | Rice | nucleus | 35.44 | 15.47 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 33.33 | 15.28 |
| EES04827 | Sorghum | nucleus | 34.18 | 15.25 |
| Zm00001d016175_P001 | Maize | nucleus | 34.6 | 15.19 |
| Zm00001d046174_P001 | Maize | nucleus | 33.33 | 14.88 |
| OQU76531 | Sorghum | nucleus | 32.07 | 14.84 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 31.65 | 14.68 |
| TraesCS7D01G334100.1 | Wheat | nucleus | 31.65 | 14.51 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 32.07 | 14.5 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 32.07 | 14.39 |
| Os02t0241200-00 | Rice | nucleus | 32.91 | 14.31 |
| Zm00001d037015_P001 | Maize | nucleus | 33.33 | 14.26 |
| PGSC0003DMT400047532 | Potato | nucleus | 21.52 | 14.13 |
| Bra000270.1-P | Field mustard | nucleus | 15.61 | 12.85 |
| PGSC0003DMT400042480 | Potato | nucleus | 10.97 | 12.68 |
| PGSC0003DMT400017981 | Potato | nucleus | 19.83 | 12.47 |
| PGSC0003DMT400043200 | Potato | nucleus | 19.41 | 11.56 |
| PGSC0003DMT400034663 | Potato | nucleus | 19.83 | 10.44 |
| PGSC0003DMT400042402 | Potato | nucleus | 7.59 | 10.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | UniProt:M0ZZ73 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG400004389 |
| PGSC:PGSC0003DMG400004389 | EnsemblPlants:PGSC0003DMT400011207 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF43 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000294C4D7 | SEG:seg | : | : |
Description
MYB transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400004389]
Coordinates
chr3:+:1554796..1557143
Molecular Weight (calculated)
27201.2 Da
IEP (calculated)
9.999
GRAVY (calculated)
-0.732
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDSIDLNE EVGDQEAIEV IISDESHEKI IDENNNSTSC GDYESNKRVR QYVRSKLPRL RWTPELHLSF VSAIDRLGGQ ERATPKLVLQ MMNVRGLSIA
101: HVKSHLQMYR SKKLGEFGQV LGHGYRTNQG RSYLYGKLSQ RLFNPLQDFK MKNGAIVLAR NFNDDDNVNN HFQISFARTP HETKENFSRF RVRALSIEKV
201: MLGVPPPNGP YSPRFEFSRD SNASFGHRVG IQRKKES
101: HVKSHLQMYR SKKLGEFGQV LGHGYRTNQG RSYLYGKLSQ RLFNPLQDFK MKNGAIVLAR NFNDDDNVNN HFQISFARTP HETKENFSRF RVRALSIEKV
201: MLGVPPPNGP YSPRFEFSRD SNASFGHRVG IQRKKES
001: MAGRSSPGKC STWLDLNREE TVEKNNEEES SVEDEDQITN NVRQYIRSNM PRLRWTPDLH LSFVRAVQRL GGPDRATPKL VLEMMNLKGL SIAHVKSHLQ
101: MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN
201: NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS TSSEP
101: MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN
201: NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS TSSEP
Arabidopsis Description
At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.