Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g045000.2.1 | Tomato | nucleus | 72.22 | 88.64 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 19.91 | 59.72 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 41.67 | 56.96 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 17.13 | 41.11 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 18.98 | 37.61 |
| KRH14524 | Soybean | nucleus | 30.56 | 35.29 |
| KRH73595 | Soybean | nucleus | 32.87 | 33.33 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 25.46 | 26.7 |
| Zm00001d046981_P001 | Maize | nucleus | 23.15 | 23.7 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 7.87 | 22.67 |
| TraesCS7A01G470100.1 | Wheat | nucleus | 26.39 | 22.62 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 25.46 | 22.0 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 25.0 | 21.95 |
| TraesCS7D01G457400.1 | Wheat | nucleus | 25.46 | 21.91 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 24.07 | 21.67 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 24.54 | 21.63 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 24.54 | 21.46 |
| TraesCS7A01G469900.1 | Wheat | nucleus | 24.54 | 21.29 |
| TraesCS7D01G457300.1 | Wheat | nucleus | 24.54 | 21.2 |
| HORVU7Hr1G107680.8 | Barley | nucleus | 25.46 | 21.07 |
| HORVU7Hr1G107670.1 | Barley | nucleus | 23.61 | 20.56 |
| OQU76857 | Sorghum | nucleus | 24.07 | 20.31 |
| Os06t0670300-01 | Rice | nucleus | 23.61 | 19.92 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 22.69 | 19.92 |
| HORVU7Hr1G107630.5 | Barley | mitochondrion | 24.07 | 19.19 |
| Zm00001d036638_P001 | Maize | nucleus | 22.22 | 18.05 |
| PGSC0003DMT400075668 | Potato | nucleus | 25.46 | 17.86 |
| PGSC0003DMT400011207 | Potato | nucleus | 18.52 | 16.88 |
| PGSC0003DMT400041071 | Potato | nucleus | 20.37 | 14.57 |
| TraesCSU01G097800.1 | Wheat | plastid | 12.96 | 14.36 |
| PGSC0003DMT400038366 | Potato | nucleus | 16.2 | 13.57 |
| PGSC0003DMT400042480 | Potato | nucleus | 12.5 | 13.17 |
| PGSC0003DMT400068508 | Potato | nucleus | 19.91 | 13.15 |
| PGSC0003DMT400026419 | Potato | nucleus | 20.83 | 12.93 |
| PGSC0003DMT400030518 | Potato | nucleus | 18.06 | 12.66 |
| PGSC0003DMT400077217 | Potato | nucleus | 22.22 | 12.6 |
| PGSC0003DMT400042402 | Potato | nucleus | 10.19 | 12.57 |
| PGSC0003DMT400047532 | Potato | nucleus | 18.98 | 11.36 |
| CDY69675 | Canola | cytosol, nucleus | 5.56 | 10.34 |
| PGSC0003DMT400017981 | Potato | nucleus | 17.13 | 9.81 |
| PGSC0003DMT400043200 | Potato | nucleus | 17.59 | 9.55 |
| PGSC0003DMT400034663 | Potato | nucleus | 18.06 | 8.67 |
| Zm00001d020382_P001 | Maize | nucleus, plastid | 1.85 | 3.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | UniProt:M0ZK30 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG400000922 |
| PGSC:PGSC0003DMG400000922 | EnsemblPlants:PGSC0003DMT400002410 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296EF38 | SEG:seg | : | : |
Description
Myb-like DNA-binding domain, SHAQKYF class family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000922]
Coordinates
chr7:-:42785713..42789732
Molecular Weight (calculated)
24662.8 Da
IEP (calculated)
6.170
GRAVY (calculated)
-0.762
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSIPRLRW TPQLHELFIE VVQLLGGGHK ATPKRIQQMM AVKGLKISHV KSHLQMYRNL KERGNLNIVN SVNNFHEETP QFSWSSPYEH VSETILEHGP
101: SKSSKQIDPG SDKFPNYKAI INAYIAENNI YCYDYQEAQG SLSSGMTKEE EEDDGGGPIS SEICEFPHER EINFWPLNDY NHQNSQNDSS TKQVLKSTKD
201: DPHVNLDLSI SSCFYC
101: SKSSKQIDPG SDKFPNYKAI INAYIAENNI YCYDYQEAQG SLSSGMTKEE EEDDGGGPIS SEICEFPHER EINFWPLNDY NHQNSQNDSS TKQVLKSTKD
201: DPHVNLDLSI SSCFYC
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.