Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G470200.1 | Wheat | nucleus | 62.56 | 49.59 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 61.54 | 48.98 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 60.51 | 47.77 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 60.0 | 47.56 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 54.87 | 44.58 |
| HORVU7Hr1G107680.8 | Barley | nucleus | 59.49 | 44.44 |
| HORVU7Hr1G107630.5 | Barley | mitochondrion | 58.46 | 42.07 |
| OQU76857 | Sorghum | nucleus | 45.13 | 34.38 |
| Os06t0670300-01 | Rice | nucleus | 44.1 | 33.59 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 9.23 | 16.51 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 17.44 | 16.5 |
| KRH14524 | Soybean | nucleus | 14.87 | 15.51 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 5.64 | 15.28 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 12.31 | 15.19 |
| Solyc07g045000.2.1 | Tomato | nucleus | 13.33 | 14.77 |
| CDY69675 | Canola | cytosol, nucleus | 8.72 | 14.66 |
| KRH73595 | Soybean | nucleus | 15.9 | 14.55 |
| Solyc12g006280.1.1 | Tomato | nucleus | 12.31 | 13.79 |
| PGSC0003DMT400002410 | Potato | nucleus | 14.36 | 12.96 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 5.13 | 11.11 |
| Zm00001d020382_P001 | Maize | nucleus, plastid | 4.62 | 8.41 |
Protein Annotations
| EnsemblPlants:TraesCSU01G097800.1 | EnsemblPlantsGene:TraesCSU01G097800 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrUn:+:86902448..86903525
Molecular Weight (calculated)
21029.2 Da
IEP (calculated)
7.326
GRAVY (calculated)
-0.658
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAKGVSISH IKSHLQMYRS SSSNTTCNGL PNASVASRRD HRVVDGPGHR NGNDMGERTN DASSYAVPPH GHRSLPPYQL PSIEEVFRSW EQSRGRLPWN
101: SSMPSEKATR WACHADRSTR QQHQPAAGCD LTLSIGRWEA EAEAASSDAD ISSTTTEEVA VPARDRGAGG HHRSAFATGL VLDLNLDLAV SSSCL
101: SSMPSEKATR WACHADRSTR QQHQPAAGCD LTLSIGRWEA EAEAASSDAD ISSTTTEEVA VPARDRGAGG HHRSAFATGL VLDLNLDLAV SSSCL
001: MNVKGLSIAH VKSHLQMYRS KKTDEPNEGD QGFSFEHGAG YTYNLSQLPM LQSFDQRPSS SLGYGGGSWT DHRRQIYRSP WRGLTTRENT RTRQTMFSSQ
101: PGERYHGVSN SILNDKNKTI SFRINSHEGV HDNNGVAGAV PRIHRSFLEG MKTFNKSWGQ SLSSNLKSST ATIPQDHIAT TLNSYQWENA GVAEGSENVL
201: KRKRLLFSDD CNKSDQDLDL SLSLKVPRTH DNLGECLLED EVKEHDDHQD IKSLSLSLSS SGSSKLDRTI RKEDQTDHKK RKISVLASPL DLTL
101: PGERYHGVSN SILNDKNKTI SFRINSHEGV HDNNGVAGAV PRIHRSFLEG MKTFNKSWGQ SLSSNLKSST ATIPQDHIAT TLNSYQWENA GVAEGSENVL
201: KRKRLLFSDD CNKSDQDLDL SLSLKVPRTH DNLGECLLED EVKEHDDHQD IKSLSLSLSS SGSSKLDRTI RKEDQTDHKK RKISVLASPL DLTL
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.