Factsheet for GSMUA_Achr7P03510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g00980.t01	Wine grape	nucleus	20.39	58.33
GSMUA_Achr5P00310_001	Banana	nucleus	20.39	46.67
GSMUA_Achr9P30700_001	Banana	mitochondrion	24.27	45.87
HORVU7Hr1G107500.1	Barley	mitochondrion	16.02	44.0
KRH14524	Soybean	nucleus	32.04	35.29
Zm00001d046981_P001	Maize	nucleus	33.5	32.7
KRH73595	Soybean	nucleus	33.5	32.39
PGSC0003DMT400074183	Potato	mitochondrion	23.79	31.01
OQU76857	Sorghum	nucleus	37.38	30.08
TraesCS7D01G457400.1	Wheat	nucleus	35.92	29.48
TraesCS7B01G372200.1	Wheat	nucleus	34.95	29.39
TraesCS7A01G470100.1	Wheat	nucleus	35.92	29.37
Solyc12g006280.1.1	Tomato	nucleus	24.76	29.31
TraesCS7B01G372000.1	Wheat	nucleus	35.44	29.2
TraesCS7B01G372100.1	Wheat	nucleus	33.98	29.17
HORVU7Hr1G107670.1	Barley	nucleus	34.95	29.03
TraesCS7A01G469900.1	Wheat	nucleus	34.95	28.92
TraesCS7D01G457500.1	Wheat	nucleus	34.47	28.86
TraesCS7D01G457300.1	Wheat	nucleus	34.95	28.8
TraesCS7D01G457600.1	Wheat	nucleus	34.47	28.74
TraesCS7A01G470200.1	Wheat	nucleus	33.5	28.05
Zm00001d036638_P001	Maize	nucleus	35.44	27.44
Os06t0670300-01	Rice	nucleus	33.98	27.34
HORVU7Hr1G107680.8	Barley	nucleus	33.01	26.05
PGSC0003DMT400002410	Potato	nucleus	26.7	25.46
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	18.93	23.08
GSMUA_Achr4P25920_001	Banana	nucleus	24.76	20.56
GSMUA_Achr2P11010_001	Banana	nucleus	29.13	20.55
GSMUA_Achr11P...	Banana	nucleus	22.82	20.09
HORVU7Hr1G107630.5	Barley	mitochondrion	25.73	19.56
Solyc07g045000.2.1	Tomato	nucleus	16.02	18.75
GSMUA_Achr10P...	Banana	nucleus	18.93	18.66
GSMUA_Achr1P23970_001	Banana	nucleus	18.45	18.54
TraesCSU01G097800.1	Wheat	plastid	16.5	17.44
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	18.45	16.96
GSMUA_AchrUn_...	Banana	nucleus	24.27	16.95
GSMUA_Achr1P22100_001	Banana	nucleus	17.96	16.89
GSMUA_Achr11P...	Banana	nucleus	19.42	16.88
GSMUA_Achr9P23320_001	Banana	nucleus	17.96	16.37
GSMUA_Achr2P18070_001	Banana	nucleus	21.36	16.36
GSMUA_Achr7P22410_001	Banana	nucleus	26.21	16.27
GSMUA_Achr10P...	Banana	nucleus	21.84	16.19
GSMUA_Achr5P19200_001	Banana	nucleus	22.33	16.08
GSMUA_Achr4P32400_001	Banana	plastid	18.45	15.14
GSMUA_Achr2P13320_001	Banana	nucleus, plastid	19.9	14.86
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	18.93	14.34
GSMUA_Achr3P00380_001	Banana	nucleus	17.96	14.12
GSMUA_AchrUn_...	Banana	nucleus	22.33	13.45
GSMUA_AchrUn_...	Banana	nucleus	20.39	12.92
GSMUA_Achr7P09370_001	Banana	nucleus	22.82	12.43
GSMUA_Achr4P04510_001	Banana	nucleus	22.33	12.27
GSMUA_Achr7P02420_001	Banana	nucleus	20.39	11.86
GSMUA_AchrUn_...	Banana	nucleus	17.96	11.82
GSMUA_Achr8P30770_001	Banana	nucleus	19.9	11.55
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	21.84	10.9
GSMUA_Achr8P22900_001	Banana	nucleus	19.9	10.88
GSMUA_Achr7P13880_001	Banana	nucleus	21.36	10.73
GSMUA_AchrUn_...	Banana	nucleus	20.39	10.61
GSMUA_Achr10P...	Banana	nucleus	25.73	10.23
CDY69675	Canola	cytosol, nucleus	4.85	8.62
Zm00001d020382_P001	Maize	nucleus, plastid	1.94	3.74

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G03510_001
EnsemblPlants:GSMUA_Achr7P03510_001	EnsemblPlants:GSMUA_Achr7T03510_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0TEE1	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00029545C1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G03510_001]

Coordinates

chr7:-:2775433..2778550

Molecular Weight (calculated)

23528.9 Da

IEP (calculated)

10.107

GRAVY (calculated)

-0.728

Length

206 amino acids

Sequence
(BLAST)

001: MRFLGRRVRQ YNRTDAPRMR WTEELHRCFV EAVDCLGGET EATPKRIQQL MGVKGISISH VKSHLQMYRS TSTHCEKNRS TQREAPRHDV LMAYSLPKQR
101: ADAHLGLTRS IQSPTFEELL RDWAAKNMAS IFPRDTLTED NSQLLQLAYS QRSPPKETNR EPSLSSFAYR NQRSLADTGD RGSSAAKKHV NLELTISSPA
201: CLSSFF

Best Arabidopsis Sequence Match ( AT2G40260.1 )
(BLAST)

001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.