Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 64.94 | 59.93 |
| Zm00001d041376_P001 | Maize | nucleus | 30.68 | 50.0 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 42.63 | 47.77 |
| Zm00001d030911_P001 | Maize | cytosol | 31.08 | 43.82 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 28.69 | 42.6 |
| Os03t0624000-00 | Rice | nucleus | 29.08 | 40.11 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 13.94 | 38.89 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 41.04 | 37.32 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 29.08 | 35.61 |
| GSMUA_Achr11P... | Banana | nucleus | 33.07 | 35.02 |
| GSMUA_Achr10P... | Banana | nucleus | 29.08 | 34.93 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 14.74 | 33.95 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 29.48 | 32.74 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 27.49 | 31.51 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 33.07 | 30.86 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 31.87 | 30.53 |
| TraesCS5B01G068000.1 | Wheat | nucleus | 40.24 | 29.28 |
| TraesCS5D01G075600.1 | Wheat | nucleus | 39.44 | 28.86 |
| HORVU5Hr1G017410.10 | Barley | nucleus | 39.04 | 28.49 |
| TraesCS5A01G064700.1 | Wheat | nucleus | 39.44 | 28.37 |
| GSMUA_Achr10P... | Banana | nucleus | 29.88 | 26.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.67 | 26.2 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 34.66 | 24.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.08 | 24.0 |
| HORVU4Hr1G012040.5 | Barley | nucleus | 35.46 | 23.86 |
| TraesCS4B01G072500.1 | Wheat | nucleus | 35.06 | 23.72 |
| TraesCS4D01G071300.1 | Wheat | nucleus | 34.66 | 23.45 |
| TraesCS4A01G242600.1 | Wheat | nucleus | 34.66 | 23.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.87 | 23.39 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 33.86 | 22.55 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 33.47 | 22.4 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 31.47 | 22.25 |
| EER91215 | Sorghum | nucleus | 36.65 | 21.55 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 33.86 | 20.58 |
| GSMUA_Achr11P... | Banana | nucleus | 19.12 | 20.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.47 | 19.95 |
| OQU79478 | Sorghum | nucleus | 35.86 | 19.48 |
| Zm00001d033310_P001 | Maize | nucleus | 32.27 | 18.79 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 15.14 | 18.45 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 16.73 | 16.94 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 18.73 | 16.43 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 21.12 | 15.96 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 18.33 | 15.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.33 | 15.59 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 20.32 | 13.49 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 20.32 | 12.44 |
| GSMUA_Achr10P... | Banana | nucleus | 23.11 | 11.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr4G32400_001 |
| EnsemblPlants:GSMUA_Achr4P32400_001 | EnsemblPlants:GSMUA_Achr4T32400_001 | InterPro:Homeobox-like_sf | UniProt:M0SU02 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00029697C1 |
| SEG:seg | : | : | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G32400_001]
Coordinates
chr4:-:29186074..29191422
Molecular Weight (calculated)
27900.0 Da
IEP (calculated)
10.206
GRAVY (calculated)
-0.673
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIFPDLSL HISPPSISAS RGEPTLTLGI EVPLTGSRDS RHHHHHQHHP QVFGFKRNPR SSHGRSRSSR APRMRWTTAL HAHFVHAVEL LGGHERATPK
101: SVLELMNVKD LTLAHVKSHL QMYRTVKSSD RGGGGGGQAD MGMNQRTRVE EVEGGLPCDK AGNEITPSHN SFTMPTPPTP LLNSPSLLYP SAERKAWNTS
201: TNQNAVSPYP YFSSDHLLDS DTQVRSQHPQ VSYLHLKATM KAKERTIYIY S
101: SVLELMNVKD LTLAHVKSHL QMYRTVKSSD RGGGGGGQAD MGMNQRTRVE EVEGGLPCDK AGNEITPSHN SFTMPTPPTP LLNSPSLLYP SAERKAWNTS
201: TNQNAVSPYP YFSSDHLLDS DTQVRSQHPQ VSYLHLKATM KAKERTIYIY S
001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI
Arabidopsis Description
KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.