Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041376_P001 | Maize | nucleus | 31.1 | 42.21 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 17.22 | 40.0 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 32.06 | 39.65 |
| Zm00001d030911_P001 | Maize | cytosol | 31.1 | 36.52 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 18.66 | 35.78 |
| Os03t0624000-00 | Rice | nucleus | 28.23 | 32.42 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 34.45 | 32.14 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 30.62 | 31.22 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 31.58 | 30.14 |
| GSMUA_Achr11P... | Banana | nucleus | 33.49 | 29.54 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 34.93 | 29.08 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 31.1 | 28.76 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 34.93 | 26.84 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 34.45 | 26.77 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 34.93 | 26.45 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 33.01 | 26.34 |
| GSMUA_Achr10P... | Banana | nucleus | 33.01 | 24.82 |
| TraesCS5B01G068000.1 | Wheat | nucleus | 39.23 | 23.77 |
| TraesCS5D01G075600.1 | Wheat | nucleus | 38.76 | 23.62 |
| HORVU5Hr1G017410.10 | Barley | nucleus | 38.28 | 23.26 |
| TraesCS5A01G064700.1 | Wheat | nucleus | 38.76 | 23.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.01 | 22.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.01 | 21.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.45 | 21.05 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 34.93 | 20.62 |
| TraesCS4B01G072500.1 | Wheat | nucleus | 36.36 | 20.49 |
| TraesCS4A01G242600.1 | Wheat | nucleus | 36.36 | 20.49 |
| TraesCS4D01G071300.1 | Wheat | nucleus | 36.36 | 20.49 |
| HORVU4Hr1G012040.5 | Barley | nucleus | 36.36 | 20.38 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 33.97 | 20.0 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 34.45 | 19.1 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 33.97 | 18.93 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 18.66 | 18.93 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 36.36 | 18.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.45 | 18.18 |
| GSMUA_Achr11P... | Banana | nucleus | 20.1 | 17.95 |
| EER91215 | Sorghum | nucleus | 36.36 | 17.8 |
| Zm00001d033310_P001 | Maize | nucleus | 34.93 | 16.94 |
| OQU79478 | Sorghum | nucleus | 36.84 | 16.67 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 18.18 | 15.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.57 | 14.58 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 19.62 | 14.34 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 19.62 | 14.04 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 22.01 | 13.86 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 21.05 | 11.64 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 21.05 | 10.73 |
| GSMUA_Achr10P... | Banana | nucleus | 22.49 | 9.07 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G28630_001 |
| EnsemblPlants:GSMUA_Achr10P28630_001 | EnsemblPlants:GSMUA_Achr10T28630_001 | InterPro:Homeobox-like_sf | UniProt:M0RM87 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296706E |
| SEG:seg | : | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G28630_001]
Coordinates
chr10:-:31384186..31385398
Molecular Weight (calculated)
23078.2 Da
IEP (calculated)
10.065
GRAVY (calculated)
-0.734
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKCTDLSL QISASSTTVI HGSSPNWDLF GDPSMEEPIS SRRRSEVNEP KYGEPSLRLE LKVQASGPDD HRRNQHPRSG VKRSLGKRSS RAPRMRWTTS
101: LHAHFVHAVE LLGGHERATP KSILELMNVK DLTLVHVKSH LQTYRTVRST NRVAGQTQAD MGMSKRTGSG EAEEVLAGDK AGNEFIIPSY TSLTSSTTPP
201: RTLPNPQGL
101: LHAHFVHAVE LLGGHERATP KSILELMNVK DLTLVHVKSH LQTYRTVRST NRVAGQTQAD MGMSKRTGSG EAEEVLAGDK AGNEFIIPSY TSLTSSTTPP
201: RTLPNPQGL
001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP
Arabidopsis Description
KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.