Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 24.67 | 55.03 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 46.15 | 49.15 |
| Solyc05g051060.2.1 | Tomato | nucleus | 36.34 | 48.24 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 25.99 | 47.8 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 26.26 | 45.21 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 31.83 | 44.61 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 26.53 | 44.25 |
| PGSC0003DMT400017981 | Potato | nucleus | 43.77 | 43.77 |
| GSMUA_Achr10P... | Banana | nucleus | 31.57 | 42.81 |
| GSMUA_Achr11P... | Banana | nucleus | 26.79 | 42.62 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 40.05 | 42.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.28 | 40.92 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 27.32 | 39.31 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 9.28 | 38.89 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 23.08 | 38.84 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 25.99 | 36.03 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 26.26 | 35.87 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 10.34 | 35.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.83 | 35.09 |
| GSMUA_Achr10P... | Banana | nucleus | 19.1 | 34.45 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 22.55 | 33.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.59 | 33.23 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 34.22 | 31.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.03 | 29.55 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 29.18 | 29.33 |
| GSMUA_Achr11P... | Banana | nucleus | 13.0 | 20.94 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 10.88 | 19.9 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 13.79 | 18.18 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 13.26 | 17.12 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 11.14 | 16.94 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 14.85 | 16.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.73 | 16.27 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 15.65 | 15.61 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 15.92 | 14.63 |
| GSMUA_Achr10P... | Banana | nucleus | 17.51 | 12.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G22900_001 |
| EnsemblPlants:GSMUA_Achr8P22900_001 | EnsemblPlants:GSMUA_Achr8T22900_001 | InterPro:Homeobox-like_sf | UniProt:M0TSU3 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296AFF6 | SEG:seg |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_43.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G22900_001]
Coordinates
chr8:-:27411141..27416139
Molecular Weight (calculated)
41430.5 Da
IEP (calculated)
7.596
GRAVY (calculated)
-0.622
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAASAPSPD LSLHISLPNT APSVSGGGIA IDQGNSTIEL RQAGGGGNNA YTELSLSYPW AAPQAESSWQ QRMLSVRQSP PFDHCCRNRS TLDGLMEGSR
101: PIKGIPVYNN SAFPFLPLDP KYGFSSNLDM MPSSLLNPVG GVSAYTRMVT PPTRFNGFSP DLLIKNHYQH HQLFQHPHHQ HHYGTRPFDS SHNLMRSRFL
201: PKLPGKRSMR APRMRWTSTL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTLKTTD KPAASSGQSD GSGEEDSAPS NDDLNFGRLG
301: EQRVSSADGL KPSHGLDSLS SITNTAASFS RDAWAQPSAG DIDELRPSEF SSDTEELKNP SLEFTLGRPD WQGRKHL
101: PIKGIPVYNN SAFPFLPLDP KYGFSSNLDM MPSSLLNPVG GVSAYTRMVT PPTRFNGFSP DLLIKNHYQH HQLFQHPHHQ HHYGTRPFDS SHNLMRSRFL
201: PKLPGKRSMR APRMRWTSTL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTLKTTD KPAASSGQSD GSGEEDSAPS NDDLNFGRLG
301: EQRVSSADGL KPSHGLDSLS SITNTAASFS RDAWAQPSAG DIDELRPSEF SSDTEELKNP SLEFTLGRPD WQGRKHL
001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
Arabidopsis Description
KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.