Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P23320_001 | Banana | nucleus | 54.15 | 49.12 |
| GSMUA_Achr10P... | Banana | nucleus | 65.85 | 48.56 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 60.49 | 47.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 76.59 | 45.91 |
| GSMUA_Achr11P... | Banana | nucleus | 50.24 | 43.46 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 34.63 | 42.01 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 52.2 | 39.78 |
| KRH74367 | Soybean | nucleus | 52.68 | 39.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 59.51 | 38.98 |
| CDX84102 | Canola | nucleus | 50.73 | 38.38 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 16.59 | 37.78 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 40.0 | 37.44 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 70.73 | 35.11 |
| HORVU6Hr1G000410.1 | Barley | nucleus | 55.61 | 34.65 |
| TraesCS6D01G011600.1 | Wheat | nucleus | 55.12 | 34.04 |
| TraesCS6A01G007300.1 | Wheat | nucleus | 55.12 | 34.04 |
| TraesCS6B01G012800.1 | Wheat | nucleus | 54.63 | 33.63 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 36.59 | 33.48 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 17.56 | 33.03 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 60.0 | 32.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.0 | 31.06 |
| GSMUA_Achr10P... | Banana | nucleus | 31.22 | 30.62 |
| Bra023254.1-P | Field mustard | nucleus | 54.15 | 30.33 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 35.61 | 29.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.85 | 28.92 |
| AT1G32240.1 | Thale cress | nucleus | 54.15 | 28.61 |
| KRH39575 | Soybean | nucleus | 54.15 | 28.46 |
| Bra033844.1-P | Field mustard | nucleus | 53.17 | 27.81 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 36.59 | 27.17 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 46.83 | 27.12 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 34.63 | 26.1 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 47.8 | 25.99 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 44.39 | 25.63 |
| PGSC0003DMT400034663 | Potato | nucleus | 52.2 | 23.78 |
| Solyc11g011770.1.1 | Tomato | nucleus | 52.2 | 23.16 |
| KRG97985 | Soybean | nucleus | 50.24 | 21.64 |
| KRH30907 | Soybean | nucleus | 51.22 | 20.79 |
| GSMUA_Achr11P... | Banana | nucleus | 22.44 | 19.66 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 18.54 | 18.45 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 23.41 | 16.78 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 19.02 | 15.73 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 21.46 | 15.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.46 | 14.92 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 23.41 | 14.46 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 24.39 | 13.23 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 25.37 | 12.68 |
| GSMUA_Achr10P... | Banana | nucleus | 26.83 | 10.62 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G23970_001 |
| EnsemblPlants:GSMUA_Achr1P23970_001 | EnsemblPlants:GSMUA_Achr1T23970_001 | InterPro:Homeobox-like_sf | UniProt:M0S2K4 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002967A47 | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G23970_001]
Coordinates
chr1:-:18387362..18388800
Molecular Weight (calculated)
23033.2 Da
IEP (calculated)
9.606
GRAVY (calculated)
-0.693
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFSAAPDL SLQIGSDDAT PPSWRKPDET MDWMKPITGI PIYQHPPSFP LVAPHQQQHL CGPSSSTHGF TPFMASQSLS RSRYLPSRFP GRRSMRAPRM
101: RWTTALHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TLKNTDKLAV PSGQSDGFEN GSTRENSDEN PAGVRDFDRS ESWGHRLDHV
201: GARPR
101: RWTTALHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TLKNTDKLAV PSGQSDGFEN GSTRENSDEN PAGVRDFDRS ESWGHRLDHV
201: GARPR
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.