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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 4
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G007300.1 Wheat nucleus 96.08 96.08
TraesCS6B01G012800.1 Wheat nucleus 96.08 95.8
HORVU6Hr1G000410.1 Barley nucleus 92.17 93.01
GSMUA_Achr1P23970_001 Banana nucleus 34.04 55.12
KRH74367 Soybean nucleus 34.94 42.03
CDX84102 Canola nucleus 33.73 41.33
TraesCS7D01G294400.1 Wheat nucleus 40.66 38.9
GSMUA_AchrUn_... Banana nucleus 39.16 38.01
KRH39575 Soybean nucleus 42.17 35.9
Bra023254.1-P Field mustard nucleus 38.86 35.25
AT1G32240.1 Thale cress nucleus 40.36 34.54
Bra033844.1-P Field mustard nucleus 39.16 33.16
TraesCS6D01G248300.1 Wheat cytosol, nucleus, peroxisome, plastid 33.73 31.37
PGSC0003DMT400034663 Potato nucleus 39.16 28.89
Solyc11g011770.1.1 Tomato nucleus 39.16 28.14
TraesCS5D01G209600.1 Wheat nucleus, plastid 37.95 28.06
KRG97985 Soybean nucleus 38.25 26.68
TraesCS5D01G075600.1 Wheat nucleus 26.51 25.66
KRH30907 Soybean nucleus 38.55 25.35
TraesCS4D01G071300.1 Wheat nucleus 28.01 25.07
TraesCS5D01G412800.1 Wheat mitochondrion, plastid 27.11 23.87
TraesCS7D01G457600.1 Wheat nucleus 15.06 20.24
TraesCS7D01G457400.1 Wheat nucleus 15.06 19.92
TraesCS7D01G457500.1 Wheat nucleus 14.46 19.51
TraesCS7D01G457300.1 Wheat nucleus 14.46 19.2
TraesCS2D01G400100.2 Wheat mitochondrion, nucleus 15.36 17.47
TraesCS5D01G158300.1 Wheat nucleus 16.87 17.28
TraesCS6D01G236000.1 Wheat mitochondrion 15.66 17.11
TraesCS4D01G131500.1 Wheat nucleus 16.57 16.13
TraesCS1D01G205800.1 Wheat nucleus 15.96 15.06
TraesCS6D01G098200.1 Wheat nucleus 18.67 13.05
TraesCS4D01G320400.1 Wheat nucleus 15.66 12.12
TraesCS7D01G334100.1 Wheat nucleus 18.37 11.8
Protein Annotations
EnsemblPlants:TraesCS6D01G011600.1EnsemblPlantsGene:TraesCS6D01G011600Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:Myb_dom_plantsInterPro:SANT/MybPANTHER:PTHR31496PANTHER:PTHR31496:SF4
PFAM:PF00249SEG:segSUPFAM:SSF46689TIGRFAMs:TIGR01557MapMan:15.5.2.3:
Description
No Description!
Coordinates
chr6D:+:4517363..4521430
Molecular Weight (calculated)
35879.7 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.735
Length
332 amino acids
Sequence
(BLAST)
001: MELFPRQPDL ALQISNTSSS STPPTAPPGS WGRPPDATGA TNMDHFSHHL GFLRAGATDM ANKDGTPPSA WTPPPSAATA ASYSNHISNH YHHRMNALLK
101: PIRGVPIYHH HPSFQQLQHQ HMAMAYRSSG GGGGGGFLSS RSRFPPGRRS VRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS
201: HLQMYRTIKS TDKPMTSPGQ NEGFDNGSAG EISDESLPEA LNTHRGTDQN GTSANSHSSS SYNGGLWSNS SSRVGWPGFG PNGTENRGQC HKEADASKSL
301: EMSGEMNVSC ISDQTSSPPV PNLEFTLGRT HH
Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.