Factsheet for HORVU6Hr1G000410.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G007300.1	Wheat	nucleus	93.31	92.47
TraesCS6D01G011600.1	Wheat	nucleus	93.01	92.17
TraesCS6B01G012800.1	Wheat	nucleus	92.4	91.29
GSMUA_Achr1P23970_001	Banana	nucleus	34.65	55.61
HORVU7Hr1G070420.2	Barley	nucleus	23.1	45.51
KRH74367	Soybean	nucleus	35.56	42.39
CDX84102	Canola	nucleus	34.35	41.7
GSMUA_AchrUn_...	Banana	nucleus	38.91	37.43
KRH39575	Soybean	nucleus	42.55	35.9
Bra023254.1-P	Field mustard	nucleus	39.51	35.52
AT1G32240.1	Thale cress	nucleus	41.03	34.79
Bra033844.1-P	Field mustard	nucleus	39.82	33.42
HORVU7Hr1G107500.1	Barley	mitochondrion	6.99	30.67
PGSC0003DMT400034663	Potato	nucleus	39.51	28.89
HORVU5Hr1G060310.22	Barley	nucleus	38.6	28.6
Solyc11g011770.1.1	Tomato	nucleus	39.51	28.14
KRG97985	Soybean	nucleus	39.21	27.1
HORVU5Hr1G017410.10	Barley	nucleus	27.05	25.87
KRH30907	Soybean	nucleus	39.21	25.54
HORVU4Hr1G012040.5	Barley	nucleus	28.88	25.47
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	28.27	24.22
HORVU7Hr1G107680.8	Barley	nucleus	14.89	18.77
HORVU1Hr1G052170.2	Barley	nucleus	14.29	18.36
HORVU7Hr1G107670.1	Barley	nucleus	13.68	18.15
HORVU6Hr1G064920.1	Barley	mitochondrion	12.46	17.37
HORVU0Hr1G016420.1	Barley	mitochondrion	12.46	17.37
HORVU2Hr1G095530.2	Barley	nucleus	15.81	17.33
HORVU7Hr1G107630.5	Barley	mitochondrion	12.16	14.76
HORVU4Hr1G082560.1	Barley	plastid	16.72	14.4
HORVU6Hr1G019650.5	Barley	nucleus	18.84	12.92
HORVU7Hr1G080530.3	Barley	nucleus	19.15	12.33

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A287T3N0	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU6Hr1G000410	EnsemblPlants:HORVU6Hr1G000410.1	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496
PANTHER:PTHR31496:SF4	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B4731BE	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:1003557..1008128

Molecular Weight (calculated)

35611.4 Da

IEP (calculated)

9.089

GRAVY (calculated)

-0.713

Length

329 amino acids

Sequence
(BLAST)

001: MELFPRQPDL ALQISTTSSS SSPPAAPPGS WGRPPDAATG AGTMDHFGHH LGFLRADNAG KDGTPPSPWT PPPPSAAGYS NHISNHYHHR MNALLKPIRG
101: VPIYHHHPSF QQLQHQHMAM AYRSSGVSGG GGFLSSRSRF PPGRRSVRAP RMRWTTTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM
201: YRTIKSTDKP MTSPGQNEGF DNGSAGEISD ESLPEALNTH RATDQNGTSA NSHSSSSYNN GGLWSNSSSR VGWPAFGTNS TENRGQCHKE ADASKSLELS
301: AEMNLSCISD QTSSPPVPNL EFTLGRTHH

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.