Factsheet for HORVU5Hr1G097900.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G412800.1	Wheat	mitochondrion, plastid	90.36	92.04
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	89.06	90.48
TraesCS5B01G407600.1	Wheat	plastid	89.32	90.03
Os03t0766500-01	Rice	mitochondrion	67.19	65.82
EER93393	Sorghum	mitochondrion, plastid	61.72	62.04
Zm00001d013187_P001	Maize	plastid	62.24	61.6
Zm00001d034181_P001	Maize	plastid	60.68	59.74
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	23.96	33.82
HORVU4Hr1G012040.5	Barley	nucleus	31.25	32.17
HORVU7Hr1G070420.2	Barley	nucleus	13.28	30.54
HORVU5Hr1G017410.10	Barley	nucleus	27.08	30.23
HORVU7Hr1G107500.1	Barley	mitochondrion	5.73	29.33
HORVU6Hr1G000410.1	Barley	nucleus	24.22	28.27
HORVU5Hr1G060310.22	Barley	nucleus	25.52	22.07
HORVU7Hr1G107670.1	Barley	nucleus	11.98	18.55
HORVU7Hr1G107680.8	Barley	nucleus	12.24	18.01
HORVU1Hr1G052170.2	Barley	nucleus	11.72	17.58
HORVU6Hr1G064920.1	Barley	mitochondrion	10.68	17.37
HORVU0Hr1G016420.1	Barley	mitochondrion	10.68	17.37
HORVU2Hr1G095530.2	Barley	nucleus	13.28	17.0
HORVU4Hr1G082560.1	Barley	plastid	15.36	15.45
HORVU7Hr1G107630.5	Barley	mitochondrion	9.64	13.65
HORVU7Hr1G080530.3	Barley	nucleus	16.93	12.72
HORVU6Hr1G019650.5	Barley	nucleus	15.36	12.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A287SG05	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU5Hr1G097900	EnsemblPlants:HORVU5Hr1G097900.4	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496
PANTHER:PTHR31496:SF6	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B47E2AA	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:606090620..606096981

Molecular Weight (calculated)

39099.3 Da

IEP (calculated)

8.313

GRAVY (calculated)

-0.137

Length

384 amino acids

Sequence
(BLAST)

001: MLQRNLPNLS LRISPPAGSS TASSGGPPAA AAKPLRSTEP AAGTDAEGSG EVGFFANPSS GGDPPGLSLG LGTSTVRADA GRPSHPQAPQ GCAFKRAAAG
101: RASPPGGSKR SVRAPRMRWT TALHARFMHA VQLLGGHERA TPKSVLELMN VKDLTLAHVK SHLQMYRTVK GTDRSSHVAT GTHIREQQMV VVDAGGRGCG
201: GGGGGVVATL RACDVDMAGF CGAPVAAAAS SAPAATTSSA AHFFCASATG AAAAAAAPLV VLVPSPPPPP IPPRRADLAP VVLEKGVAIV DSLHRCQKLD
301: YSAALQDTPQ ASKEEVSGHL PMGAHGSVEG AISGNYCSSP ASSSPSLASY ELLADDTFAP NLEISLGRHD WSMEHPEELS LKYL

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.