Factsheet for Zm00001d013187_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93393	Sorghum	mitochondrion, plastid	76.29	77.49
Zm00001d034181_P001	Maize	plastid	76.29	75.9
Os03t0766500-01	Rice	mitochondrion	64.18	63.52
TraesCS5D01G412800.1	Wheat	mitochondrion, plastid	61.6	63.4
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	61.34	62.96
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	61.6	62.24
TraesCS5B01G407600.1	Wheat	plastid	60.82	61.94
Zm00001d041376_P001	Maize	nucleus	20.36	51.3
Zm00001d030911_P001	Maize	cytosol	20.36	44.38
Zm00001d048448_P001	Maize	nucleus	10.57	35.34
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	24.48	34.93
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	26.55	27.47
Zm00001d017702_P001	Maize	peroxisome	26.55	27.11
Zm00001d049511_P001	Maize	nucleus	23.45	26.22
Zm00001d024532_P001	Maize	nucleus	23.97	26.12
Zm00001d033310_P001	Maize	nucleus	28.87	25.99
Zm00001d046981_P001	Maize	nucleus	12.11	22.27
Zm00001d032249_P002	Maize	plastid	25.26	20.33
Zm00001d036638_P001	Maize	nucleus	12.89	18.8
Zm00001d020384_P001	Maize	nucleus	24.23	18.58
Zm00001d017563_P002	Maize	nucleus	12.63	14.16
Zm00001d002649_P001	Maize	nucleus	11.86	14.02
Zm00001d005087_P001	Maize	nucleus	12.37	13.79
Zm00001d026106_P001	Maize	nucleus	11.34	12.83
Zm00001d027492_P001	Maize	mitochondrion	12.89	11.52
Zm00001d020382_P001	Maize	nucleus, plastid	3.09	11.21
Zm00001d046174_P001	Maize	nucleus	14.69	10.73
Zm00001d037015_P001	Maize	nucleus	15.21	10.65
Zm00001d016175_P001	Maize	nucleus	14.69	10.56

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A1D6GGE0	ProteinID:AQK62618.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF6
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0008440A2C	EnsemblPlantsGene:Zm00001d013187	EnsemblPlants:Zm00001d013187_P001
EnsemblPlants:Zm00001d013187_T001	SEG:seg	:	:	:	:

Description

Probable transcription factor KAN4

Coordinates

chr5:-:6107064..6112875

Molecular Weight (calculated)

40359.8 Da

IEP (calculated)

6.952

GRAVY (calculated)

-0.230

Length

388 amino acids

Sequence
(BLAST)

001: MLQSRNLPNL SLQISPPAAA SDAPAVVANP PPPTEPSTAT SYAEGSGEVG FFANPSPGPG AEPPGLSLGL ATPTRSDDDD AAGRRGHLQP QGCAFKRAAM
101: ASPPDGPSKR SSRAPRMRWT TALHARFVHA VELLGGHERA TPKSVLELMN VKDLTLAHVK SHLQMYRTVK STDRSSLLHI AAGEALPPVQ RTNTATEKAA
201: AAAAAPGRGG VVVVPVPACD DMVGICGSPS AGSAPPATAT TSAAHFLCAP AATAPLAVAP SPLPPMPPRN CRTDDDAPAV PEKGVAIVVD SLHRCQQHNF
301: SPPVLQDTHQ ETHHHEEANG QVAAMGLRAS VVVDPLATSC SSPASSSPSL ASLEHLTDDI HAPNLEISLG RRYWILERPE GLFSLKYM

Best Arabidopsis Sequence Match ( AT5G42630.1 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.