Factsheet for Zm00001d026106_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11274	Sorghum	nucleus	72.01	79.17
Zm00001d002649_P001	Maize	nucleus	70.85	74.09
Os04t0566600-01	Rice	extracellular	54.52	61.11
TraesCS2D01G400100.2	Wheat	mitochondrion, nucleus	46.94	55.14
TraesCS2A01G402700.1	Wheat	nucleus	46.94	54.39
HORVU2Hr1G095530.2	Barley	nucleus	47.23	54.0
TraesCS2B01G420900.1	Wheat	mitochondrion, nucleus	45.77	53.58
Zm00001d048448_P001	Maize	nucleus	13.99	41.38
Zm00001d017563_P002	Maize	nucleus	38.48	38.15
Zm00001d046981_P001	Maize	nucleus	17.49	28.44
Zm00001d036638_P001	Maize	nucleus	17.78	22.93
Zm00001d041376_P001	Maize	nucleus	8.75	19.48
Zm00001d005087_P001	Maize	nucleus	18.95	18.68
Zm00001d027492_P001	Maize	mitochondrion	20.41	16.13
Zm00001d030911_P001	Maize	cytosol	8.16	15.73
Zm00001d037015_P001	Maize	nucleus	20.99	13.0
Zm00001d016175_P001	Maize	nucleus	20.41	12.96
Zm00001d046174_P001	Maize	nucleus	19.83	12.81
Zm00001d049511_P001	Maize	nucleus	11.95	11.82
Zm00001d034181_P001	Maize	plastid	13.41	11.79
Zm00001d017702_P001	Maize	peroxisome	12.83	11.58
Zm00001d024532_P001	Maize	nucleus	11.95	11.52
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	12.54	11.47
Zm00001d013187_P001	Maize	plastid	12.83	11.34
Zm00001d033310_P001	Maize	nucleus	13.7	10.9
Zm00001d020382_P001	Maize	nucleus, plastid	3.21	10.28
Zm00001d032249_P002	Maize	plastid	12.83	9.13
Zm00001d020384_P001	Maize	nucleus	13.12	8.89

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100279589	MapMan:35.1	UniProt:A0A1D6JCB9	ProteinID:AQK45500.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PANTHER:PTHR31314	PANTHER:PTHR31314:SF6
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0004DE8AA4	EnsemblPlantsGene:Zm00001d026106	EnsemblPlants:Zm00001d026106_P001	EnsemblPlants:Zm00001d026106_T001
SEG:seg	:	:	:	:	:

Description

G2-like-transcription factor 41Putative MYB DNA-binding domain superfamily protein

Coordinates

chr10:-:138569154..138572986

Molecular Weight (calculated)

37272.0 Da

IEP (calculated)

8.441

GRAVY (calculated)

-0.534

Length

343 amino acids

Sequence
(BLAST)

001: MGGGGRNGTV VRRYIRSKEP RIKWSADLHR SFVQAIDCLG GQHTWLANCR SSWRCKIAEA TPKLILQFMA TRGLTISHVK SHLQMYRAAR LGAGRRGMQA
101: QLLQRRHSCT GDEQEEFLRP PPPLKRARMG YESMQGLGSH GVSDARTAAA AGGLYCIDDY MQAMAAMGWR IKEEGLTRWQ WQRRDAAAPS DLQAMGCLVQ
201: EPDPFKQMRR PEARRLGSAL RNQQDDSSEE DGNGCPLLSS SSFSNAANDD EPSDEQCSLS LSLGLDTKGA RAMATSSPSG ESSCILTAAS PARRSSSDCC
301: CSGHSGCFVG PGVSLELSLS ISGSYLDHSD SVHRPGPAGC SRW

Best Arabidopsis Sequence Match ( AT4G04605.1 )
(BLAST)

001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA

Arabidopsis Description

Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.