Factsheet for Zm00001d041376_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030911_P001	Maize	cytosol	77.92	67.42
GSMUA_Achr10P...	Banana	nucleus	42.21	31.1
GSMUA_Achr4P32400_001	Banana	plastid	50.0	30.68
Zm00001d048448_P001	Maize	nucleus	22.73	30.17
OQU79478	Sorghum	nucleus	79.22	26.41
HORVU5Hr1G017410.10	Barley	nucleus	48.7	21.8
TraesCS5D01G075600.1	Wheat	nucleus	48.05	21.57
TraesCS5A01G064700.1	Wheat	nucleus	48.7	21.49
TraesCS5B01G068000.1	Wheat	nucleus	47.4	21.16
Zm00001d033310_P001	Maize	nucleus	59.09	21.11
Zm00001d013187_P001	Maize	plastid	51.3	20.36
Zm00001d034181_P001	Maize	plastid	51.3	20.26
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	48.05	19.73
Zm00001d017702_P001	Maize	peroxisome	45.45	18.42
Zm00001d049511_P001	Maize	nucleus	38.96	17.29
Zm00001d024532_P001	Maize	nucleus	38.96	16.85
Zm00001d046981_P001	Maize	nucleus	20.78	15.17
Zm00001d032249_P002	Maize	plastid	43.51	13.9
Zm00001d020384_P001	Maize	nucleus	42.86	13.04
Zm00001d036638_P001	Maize	nucleus	21.43	12.41
Zm00001d005087_P001	Maize	nucleus	24.68	10.92
Zm00001d017563_P002	Maize	nucleus	22.73	10.12
Zm00001d002649_P001	Maize	nucleus	20.78	9.76
Zm00001d026106_P001	Maize	nucleus	19.48	8.75
Zm00001d027492_P001	Maize	mitochondrion	23.38	8.29
Zm00001d016175_P001	Maize	nucleus	26.62	7.59
Zm00001d046174_P001	Maize	nucleus	25.97	7.53
Zm00001d037015_P001	Maize	nucleus	26.62	7.4
Zm00001d020382_P001	Maize	nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A1D6MVN8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	ProteinID:ONM32873.1	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0008423C5D	EnsemblPlantsGene:Zm00001d041376	EnsemblPlants:Zm00001d041376_P001
EnsemblPlants:Zm00001d041376_T001	SEG:seg	:	:	:	:

Description

G2-like-transcription factor 42Probable transcription factor KAN4

Coordinates

chr3:+:114786221..114787925

Molecular Weight (calculated)

16549.7 Da

IEP (calculated)

10.545

GRAVY (calculated)

-0.442

Length

154 amino acids

Sequence
(BLAST)

001: MITTTTTTMT AAPDLSLHIS PPSPPEPRLL LGLELDDDTA AEAAAATKKA DDAAAMREYN NLQVQRRQLH QPSQTAGHGF KRGTSGSAAA GAGGRRSSRA
101: PRMRWTTALH AHFVHAVELL GGHERATPKS VLELMNVKDL TLAHVKSHLQ ARLH

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.