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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • nucleus 1
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G402800.1 Wheat mitochondrion, plastid 94.23 94.97
TraesCS5D01G412800.1 Wheat mitochondrion, plastid 93.44 94.43
HORVU5Hr1G097900.4 Barley mitochondrion, plastid 90.03 89.32
Os03t0766500-01 Rice mitochondrion 67.19 65.31
EER93393 Sorghum mitochondrion, plastid 62.2 62.04
Zm00001d013187_P001 Maize plastid 61.94 60.82
Zm00001d034181_P001 Maize plastid 60.63 59.23
GSMUA_Achr4P23160_001 Banana nucleus, plastid 24.93 34.93
TraesCS4B01G072500.1 Wheat nucleus 32.02 32.88
TraesCS5B01G068000.1 Wheat nucleus 26.25 28.99
TraesCS6B01G293700.1 Wheat nucleus 25.98 27.89
TraesCS6B01G012800.1 Wheat nucleus 23.62 27.03
TraesCS7B01G200700.1 Wheat nucleus, plastid 24.15 26.51
TraesCS5B01G201900.1 Wheat nucleus, plastid 25.46 21.51
TraesCS7B01G372200.1 Wheat nucleus 12.86 20.0
TraesCS7B01G372000.1 Wheat nucleus 12.6 19.2
TraesCS7B01G372100.1 Wheat nucleus 11.55 18.33
TraesCS2B01G420900.1 Wheat mitochondrion, nucleus 13.39 17.41
TraesCS6B01G270800.1 Wheat nucleus 13.91 16.67
TraesCS1B01G216600.1 Wheat nucleus 14.96 16.19
TraesCS5B01G151800.1 Wheat nucleus 13.65 15.43
TraesCS4B01G323600.1 Wheat nucleus 14.17 14.1
TraesCS4B01G136900.1 Wheat nucleus 12.07 13.57
TraesCS7B01G238000.1 Wheat nucleus 16.54 12.02
TraesCS6B01G138200.1 Wheat nucleus 15.49 11.17
Protein Annotations
EnsemblPlants:TraesCS5B01G407600.1EnsemblPlantsGene:TraesCS5B01G407600Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:Myb_dom_plantsInterPro:SANT/MybPANTHER:PTHR31496PANTHER:PTHR31496:SF6
PFAM:PF00249SEG:segSUPFAM:SSF46689TIGRFAMs:TIGR01557MapMan:15.5.2.3:
Description
No Description!
Coordinates
chr5B:+:583294578..583299953
Molecular Weight (calculated)
38572.0 Da
IEP (calculated)
8.312
GRAVY (calculated)
-0.123
Length
381 amino acids
Sequence
(BLAST)
001: MLQRNLPSLS LRISPPAGSS KASSGPPAAV GKPLRSMAPA AGTDAEGSGE VGFFANPSSG ADPPGLSLGL GTLTARADAG RHGHPQAPLG CAFKRAAPGR
101: ASQPGGSKRS VRAPRMRWTT ALHARFMHAV QLLGGHERAT PKSVLELMNV KDLTLAHVKS HLQMYRTVKG TDRSSQIATG EQQMMVVDAG GGRGCGGGGG
201: GGVVATLPAC DVDMAGFCGA PAAAAASAPP AATTSSAAHF LCASATGAAA AAAAPLVALV PSPPPPPIPP RRADHAAVAL EKGVAIVDPL HRCQKLDYSA
301: ALQDTPQEAK EEPAGRLPMG VHGGVEGAIS GNYCSSPASS SPSLASFELL ADDTFAPNLE ISLGRHDWGM EHPEELSLKY L
Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)
001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI
Arabidopsis Description
KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.