Factsheet for TraesCS6B01G012800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G011600.1	Wheat	nucleus	95.8	96.08
TraesCS6A01G007300.1	Wheat	nucleus	94.29	94.58
HORVU6Hr1G000410.1	Barley	nucleus	91.29	92.4
GSMUA_Achr1P23970_001	Banana	nucleus	33.63	54.63
KRH74367	Soybean	nucleus	35.14	42.39
CDX84102	Canola	nucleus	33.93	41.7
TraesCS7B01G200700.1	Wheat	nucleus, plastid	40.84	39.19
GSMUA_AchrUn_...	Banana	nucleus	39.04	38.01
KRH39575	Soybean	nucleus	42.34	36.15
Bra023254.1-P	Field mustard	nucleus	39.04	35.52
AT1G32240.1	Thale cress	nucleus	40.54	34.79
Bra033844.1-P	Field mustard	nucleus	39.34	33.42
TraesCS6B01G293700.1	Wheat	nucleus	35.14	32.96
PGSC0003DMT400034663	Potato	nucleus	38.14	28.22
TraesCS5B01G201900.1	Wheat	nucleus, plastid	37.24	27.49
Solyc11g011770.1.1	Tomato	nucleus	38.14	27.49
TraesCS5B01G068000.1	Wheat	nucleus	27.93	26.96
KRG97985	Soybean	nucleus	37.54	26.26
TraesCS4B01G072500.1	Wheat	nucleus	28.23	25.34
KRH30907	Soybean	nucleus	37.84	24.95
TraesCS5B01G407600.1	Wheat	plastid	27.03	23.62
TraesCS7B01G372200.1	Wheat	nucleus	15.02	20.41
TraesCS7B01G372000.1	Wheat	nucleus	15.02	20.0
TraesCS7B01G372100.1	Wheat	nucleus	14.11	19.58
TraesCS2B01G420900.1	Wheat	mitochondrion, nucleus	15.32	17.41
TraesCS5B01G151800.1	Wheat	nucleus	17.42	17.21
TraesCS6B01G270800.1	Wheat	nucleus	15.92	16.67
TraesCS4B01G136900.1	Wheat	nucleus	15.92	15.63
TraesCS1B01G216600.1	Wheat	nucleus	16.22	15.34
TraesCS4B01G323600.1	Wheat	nucleus	15.62	13.58
TraesCS7B01G238000.1	Wheat	nucleus	18.62	11.83
TraesCS6B01G138200.1	Wheat	nucleus	18.32	11.55

Protein Annotations

EnsemblPlants:TraesCS6B01G012800.1	EnsemblPlantsGene:TraesCS6B01G012800	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR31496	PANTHER:PTHR31496:SF4
PFAM:PF00249	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:

Description

No Description!

Coordinates

chr6B:-:8045848..8049840

Molecular Weight (calculated)

35842.6 Da

IEP (calculated)

9.087

GRAVY (calculated)

-0.694

Length

333 amino acids

Sequence
(BLAST)

001: MELFPRQPDL ALQISATSSS SSPPAAPPGS WGRPPDATTG ATSMDQFSQH LGFLRASATD MASKDGTPPS AWTPPPSAAN AASYSNHISN HYHHRMNALL
101: KPIRGVPIYH HHPSFQQLQH QHMAMAYRSS AGGGGGGFLS SRSRFPPGRR SVRAPRMRWT TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK
201: SHLQMYRTIK STDKSMTSPG QNEGFDNGSA GEISDESLPE ALNTHRGTDQ NGTSANSHSG SSYNGGLWSN SSSRVGWPGF GTNGTENRGQ CHKEADASKS
301: LEMSGEMNVS CISDQTSSPP VPNLEFTLGR THH

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.