Factsheet for HORVU4Hr1G012040.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G071300.1	Wheat	nucleus	94.64	95.15
TraesCS4A01G242600.1	Wheat	nucleus	93.83	94.34
TraesCS4B01G072500.1	Wheat	nucleus	93.3	93.8
GSMUA_Achr10P...	Banana	nucleus	20.38	36.36
GSMUA_Achr4P32400_001	Banana	plastid	23.86	35.46
HORVU5Hr1G017410.10	Barley	nucleus	32.17	34.88
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	32.17	31.25
HORVU7Hr1G070420.2	Barley	nucleus	13.67	30.54
HORVU6Hr1G000410.1	Barley	nucleus	25.47	28.88
HORVU7Hr1G107500.1	Barley	mitochondrion	5.63	28.0
HORVU5Hr1G060310.22	Barley	nucleus	26.54	22.3
HORVU6Hr1G064920.1	Barley	mitochondrion	12.33	19.49
HORVU0Hr1G016420.1	Barley	mitochondrion	12.33	19.49
HORVU2Hr1G095530.2	Barley	nucleus	15.55	19.33
HORVU7Hr1G107680.8	Barley	nucleus	12.6	18.01
HORVU7Hr1G107670.1	Barley	nucleus	11.8	17.74
HORVU1Hr1G052170.2	Barley	nucleus	11.53	16.8
HORVU4Hr1G082560.1	Barley	plastid	16.09	15.71
HORVU7Hr1G107630.5	Barley	mitochondrion	10.99	15.13
HORVU6Hr1G019650.5	Barley	nucleus	16.09	12.5
HORVU7Hr1G080530.3	Barley	nucleus	16.89	12.33

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G012040
EnsemblPlants:HORVU4Hr1G012040.5	InterPro:Homeobox-like_sf	UniProt:M0UDT6	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496
PANTHER:PTHR31496:SF12	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00029598C0	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:38788910..38796064

Molecular Weight (calculated)

39949.9 Da

IEP (calculated)

10.158

GRAVY (calculated)

-0.708

Length

373 amino acids

Sequence
(BLAST)

001: MATAADAPDL SLHISPPSPT GKAGSGRGDE MAISAESTEL CLGLDMAAGR QRGEVSNGHS DPEQRLHQPS QIPRFKKSSA DSQAGSSGGA ARSGSVGKKS
101: SRAPRMRWTT ALHAHFVQAV QLLGGHERAT PKSVLELMNV KDLTLAHVKS HLQMYRTVKG TTSDRSCAAG HGQIRDMGFM RRGGEVDGFD MFSNIISNTR
201: RQPWASSPAE QLRPPFAQDQ GGGGPPLPSA YLMSIHQYLM KQNQGWRGAQ QQDASLNCPG QDRGQRLHVG AHHDETPRIG SSTAGFARGW SSSSSLSLSP
301: SPSTPLQMNG RNAGSAAEQA CMKQQQQQAP SRVPSLEMSL GRQGWQNAIE QQQRQGQPNV ESSASKELTL LKC

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.