Factsheet for TraesCS4A01G242600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G071300.1	Wheat	nucleus	98.11	98.11
TraesCS4B01G072500.1	Wheat	nucleus	96.77	96.77
HORVU4Hr1G012040.5	Barley	nucleus	94.34	93.83
GSMUA_Achr10P...	Banana	nucleus	20.49	36.36
TraesCS5A01G064700.1	Wheat	nucleus	32.61	34.67
GSMUA_Achr4P32400_001	Banana	plastid	23.45	34.66
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	32.88	32.28
TraesCS6A01G007300.1	Wheat	nucleus	25.34	28.31
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	26.68	27.89
TraesCS7A01G298700.1	Wheat	nucleus	22.91	24.64
TraesCS5A01G203200.1	Wheat	nucleus	26.42	21.63
TraesCS2A01G402700.1	Wheat	nucleus	15.63	19.59
TraesCS7A01G470200.1	Wheat	nucleus	12.4	18.7
TraesCS7A01G470100.1	Wheat	nucleus	12.4	18.25
TraesCS7A01G469900.1	Wheat	nucleus	12.13	18.07
TraesCS5A01G153000.1	Wheat	nucleus	15.63	17.79
TraesCS6A01G254700.1	Wheat	nucleus	14.02	17.16
TraesCS4A01G180900.1	Wheat	nucleus	15.09	16.42
TraesCS1A01G202500.1	Wheat	nucleus	14.56	15.3
TraesCS5A01G496100.1	Wheat	nucleus	14.56	14.29
TraesCS6A01G109700.1	Wheat	nucleus	16.71	13.0
TraesCS7A01G345200.2	Wheat	nucleus	14.29	10.25

Protein Annotations

EnsemblPlants:TraesCS4A01G242600.1	EnsemblPlantsGene:TraesCS4A01G242600	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12
PFAM:PF00249	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:

Description

No Description!

Coordinates

chr4A:+:552500448..552506097

Molecular Weight (calculated)

39706.8 Da

IEP (calculated)

10.534

GRAVY (calculated)

-0.664

Length

371 amino acids

Sequence
(BLAST)

001: MATAADAPDL SLHISPPSPT GKAGSGRGDE MAISAESTEL CLGFDMATAR QPGEVRNGHS DLEQRLHQPS QIPRFKKSSA DSQAGSSGGA ARSGNGGKKS
101: SRAPRMRWTT ALHAHFVQAV QLLGGHERAT PKSVLELMNV KDLTLAHVKS HLQMYRTVKG TASDRSCAAG HGQIRDMSFL RRGGEVHGFD MFSNIISNTR
201: RRPWASPAGQ LQPPFAQEQG GGGPPLPSAY LMSIQQYLMK QNQGWRGAQQ QDASLNCPGQ DRGQRLHVGA RHDETPRIGS STAGFARGWS SSSSLSLSPS
301: PSTPLQMNGR NAGSAAEQAC MKQPQAPSRV PSLEMSLGRQ GWQNAIEQQQ RQGQPSVESS ASKELTLLKC L

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.