Factsheet for TraesCS7A01G298700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G070420.2	Barley	nucleus	46.67	96.41
TraesCS7D01G294400.1	Wheat	nucleus	96.23	95.68
TraesCS7B01G200700.1	Wheat	nucleus, plastid	96.23	95.68
Zm00001d024532_P001	Maize	nucleus	71.59	69.38
Os08t0160300-00	Rice	nucleus	68.12	68.12
Zm00001d049511_P001	Maize	nucleus	66.67	66.28
EES13398	Sorghum	nucleus	71.59	65.69
GSMUA_Achr10P...	Banana	nucleus	42.61	52.88
TraesCS6A01G007300.1	Wheat	nucleus	39.42	40.96
PGSC0003DMT400038366	Potato	nucleus	29.57	39.53
Solyc08g076400.2.1	Tomato	nucleus	28.99	38.02
GSMUA_Achr7P02420_001	Banana	nucleus	33.04	32.2
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	31.88	30.99
TraesCS5A01G203200.1	Wheat	nucleus	35.07	26.71
TraesCS5A01G064700.1	Wheat	nucleus	25.8	25.5
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	26.96	24.6
TraesCS4A01G242600.1	Wheat	nucleus	24.64	22.91
TraesCS7A01G469900.1	Wheat	nucleus	13.91	19.28
TraesCS7A01G470200.1	Wheat	nucleus	13.62	19.11
TraesCS7A01G470100.1	Wheat	nucleus	13.91	19.05
TraesCS2A01G402700.1	Wheat	nucleus	14.78	17.23
TraesCS5A01G153000.1	Wheat	nucleus	15.07	15.95
TraesCS4A01G180900.1	Wheat	nucleus	15.07	15.25
TraesCS6A01G254700.1	Wheat	nucleus	13.33	15.18
TraesCS5A01G496100.1	Wheat	nucleus	15.65	14.29
TraesCS1A01G202500.1	Wheat	nucleus	14.2	13.88
TraesCS6A01G109700.1	Wheat	nucleus	16.52	11.95
TraesCS7A01G345200.2	Wheat	nucleus	17.68	11.8

Protein Annotations

EnsemblPlants:TraesCS7A01G298700.1	EnsemblPlantsGene:TraesCS7A01G298700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR31496	PANTHER:PTHR31496:SF4
PFAM:PF00249	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:

Description

No Description!

Coordinates

chr7A:-:405949081..405952141

Molecular Weight (calculated)

36712.2 Da

IEP (calculated)

7.344

GRAVY (calculated)

-0.501

Length

345 amino acids

Sequence
(BLAST)

001: MELFPSQPDL SLQIGLPASA HGHDHHRAMG GRFFGPPSSG NIGGDPAMAA SLQLPFPMSP MPLPPHHAGA PGHGGLYYHH HPVPDGAMLR PIRGVPLYPT
101: PFPPPPPHGG PSAPATAPCY CDPCHVAGAW RRGVGGCGAR LVGFPAPKRA ARAPRMRWTS SLHSRFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS
201: HLQMYRTVKN TERPAASSDQ ADGFENGSAG EICDDNLLDL RGGGRPEALA AATRNGRLAA NDDDRSIGAG ATHGGALWNS SSREEDWSGF PCDSNNESMQ
301: SFKDHMQSKS LEILSDINSC LSETTSSASA PNLDFTLGRP HQRRS

Best Arabidopsis Sequence Match ( AT4G17695.1 )
(BLAST)

001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP

Arabidopsis Description

KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.