Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P23970_001 | Banana | nucleus | 48.56 | 65.85 |
| HORVU7Hr1G070420.2 | Barley | nucleus | 33.09 | 55.09 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 44.24 | 54.42 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 75.18 | 50.61 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 47.84 | 49.44 |
| GSMUA_Achr11P... | Banana | nucleus | 41.01 | 48.1 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 44.96 | 47.71 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 28.06 | 46.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.76 | 45.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 64.03 | 44.95 |
| Zm00001d024532_P001 | Maize | nucleus | 54.68 | 42.7 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 57.55 | 42.67 |
| Zm00001d049511_P001 | Maize | nucleus | 53.24 | 42.65 |
| TraesCS7A01G298700.1 | Wheat | nucleus | 52.88 | 42.61 |
| TraesCS7D01G294400.1 | Wheat | nucleus | 52.88 | 42.36 |
| TraesCS7B01G200700.1 | Wheat | nucleus, plastid | 52.52 | 42.07 |
| Os08t0160300-00 | Rice | nucleus | 51.44 | 41.45 |
| EES13398 | Sorghum | nucleus | 54.68 | 40.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.96 | 39.94 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 12.59 | 38.89 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 30.22 | 38.36 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 14.03 | 35.78 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 28.78 | 35.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.01 | 35.08 |
| GSMUA_Achr10P... | Banana | nucleus | 24.82 | 33.01 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 32.73 | 32.97 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 41.01 | 32.2 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 42.81 | 31.57 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 30.22 | 30.88 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 38.85 | 30.42 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 26.98 | 29.88 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 16.19 | 21.84 |
| GSMUA_Achr11P... | Banana | nucleus | 18.35 | 21.79 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 19.42 | 18.88 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 19.06 | 18.15 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 15.83 | 17.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.27 | 16.27 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 18.35 | 15.36 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 20.14 | 14.81 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 21.22 | 14.39 |
| GSMUA_Achr10P... | Banana | nucleus | 24.46 | 13.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G06430_001 |
| EnsemblPlants:GSMUA_Achr10P06430_001 | EnsemblPlants:GSMUA_Achr10T06430_001 | InterPro:Homeobox-like_sf | UniProt:M0RFX0 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | PANTHER:PTHR31496:SF4 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000294AB81 |
| SEG:seg | : | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G06430_001]
Coordinates
chr10:-:16779099..16782805
Molecular Weight (calculated)
31049.5 Da
IEP (calculated)
8.182
GRAVY (calculated)
-0.635
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFPTQPDL THQISPPNTT PASTWRKPDE SIDLGFWRRG IPVYHNPPSF PVVPLRQQQH LCDSSSTSNF APFATTQSLS RLRFLPSRFS AKRSTRAPRM
101: RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TLKNTDKPAV SSGQSDGFEN ESAGEICDDN LLDNPNPHRL GSSAQHGWSS
201: AAHHSTTHIS GLWSNPSREG CLTATIPCDE SNTGSMHSFK KDLQPKRMEM YSDLNSSCLS ETLSPCKLNL EFTLGRSQ
101: RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TLKNTDKPAV SSGQSDGFEN ESAGEICDDN LLDNPNPHRL GSSAQHGWSS
201: AAHHSTTHIS GLWSNPSREG CLTATIPCDE SNTGSMHSFK KDLQPKRMEM YSDLNSSCLS ETLSPCKLNL EFTLGRSQ
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.