Factsheet for TraesCS7D01G294400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G070420.2	Barley	nucleus	46.4	96.41
TraesCS7A01G298700.1	Wheat	nucleus	95.68	96.23
TraesCS7B01G200700.1	Wheat	nucleus, plastid	95.97	95.97
Zm00001d024532_P001	Maize	nucleus	70.89	69.1
Os08t0160300-00	Rice	nucleus	67.72	68.12
Zm00001d049511_P001	Maize	nucleus	65.71	65.71
EES13398	Sorghum	nucleus	70.61	65.16
GSMUA_Achr10P...	Banana	nucleus	42.36	52.88
TraesCS6D01G011600.1	Wheat	nucleus	38.9	40.66
PGSC0003DMT400038366	Potato	nucleus	29.68	39.92
Solyc08g076400.2.1	Tomato	nucleus	29.11	38.4
GSMUA_Achr7P02420_001	Banana	nucleus	33.43	32.77
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	31.7	30.81
TraesCS5D01G209600.1	Wheat	nucleus, plastid	34.87	26.95
TraesCS5D01G412800.1	Wheat	mitochondrion, plastid	27.67	25.46
TraesCS5D01G075600.1	Wheat	nucleus	25.07	25.36
TraesCS4D01G071300.1	Wheat	nucleus	24.21	22.64
TraesCS7D01G457400.1	Wheat	nucleus	13.83	19.12
TraesCS7D01G457500.1	Wheat	nucleus	13.54	19.11
TraesCS7D01G457600.1	Wheat	nucleus	13.54	19.03
TraesCS7D01G457300.1	Wheat	nucleus	13.54	18.8
TraesCS2D01G400100.2	Wheat	mitochondrion, nucleus	14.99	17.81
TraesCS6D01G236000.1	Wheat	mitochondrion	14.41	16.45
TraesCS5D01G158300.1	Wheat	nucleus	15.27	16.36
TraesCS4D01G131500.1	Wheat	nucleus	15.27	15.54
TraesCS1D01G205800.1	Wheat	nucleus	14.12	13.92
TraesCS7D01G334100.1	Wheat	nucleus	18.44	12.38
TraesCS4D01G320400.1	Wheat	nucleus	14.99	12.12
TraesCS6D01G098200.1	Wheat	nucleus	16.14	11.79

Protein Annotations

EnsemblPlants:TraesCS7D01G294400.1	EnsemblPlantsGene:TraesCS7D01G294400	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR31496	PANTHER:PTHR31496:SF4
PFAM:PF00249	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:

Description

No Description!

Coordinates

chr7D:-:367387799..367390841

Molecular Weight (calculated)

36990.5 Da

IEP (calculated)

7.502

GRAVY (calculated)

-0.488

Length

347 amino acids

Sequence
(BLAST)

001: MELFPSQPDL SLQIGLPASA APLGHDHHRA IGGRFFGPPS NSNIGGNPAM AVSLQLPFPM PPMPLPPHHA GAPGHGGLYY HHHPVPDGAM LRPIRGVPLY
101: PTPFPPPPPH GGPSAAATAP CYCDPCHVAG AWRRGVGGCG ARLVGFPAPK RTARAPRMRW TSSLHSRFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV
201: KSHLQMYRTV KNTERPAASS DQADGFENGS SGEICDDNLL DLRGGGRPEA VAAATRNGRF AANDDDRSIG AGATHGGALW NSSSREEDWS GFPCDSNNES
301: MQSFKDHMQS KSLEILSDMN SCLSETTSSA SAPNLDFTLG RPHQRRS

Best Arabidopsis Sequence Match ( AT4G17695.1 )
(BLAST)

001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP

Arabidopsis Description

KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.