Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P19200_001 | Banana | nucleus | 64.1 | 52.45 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 17.09 | 44.44 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 19.23 | 41.28 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 38.03 | 35.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.03 | 32.54 |
| Bra026202.1-P | Field mustard | nucleus | 24.79 | 29.0 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 33.76 | 26.07 |
| CDY45272 | Canola | nucleus | 26.5 | 25.1 |
| CDY41090 | Canola | nucleus | 26.5 | 25.1 |
| CDX81654 | Canola | nucleus | 25.64 | 24.79 |
| CDX82805 | Canola | nucleus | 25.64 | 24.79 |
| Bra026818.1-P | Field mustard | nucleus | 25.21 | 24.58 |
| CDY59419 | Canola | nucleus | 25.21 | 24.58 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 17.52 | 24.26 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 26.5 | 24.22 |
| KRG89170 | Soybean | nucleus | 29.91 | 23.81 |
| CDY70922 | Canola | nucleus | 26.07 | 23.55 |
| AT1G14600.1 | Thale cress | nucleus | 25.64 | 23.53 |
| PGSC0003DMT400075668 | Potato | nucleus | 30.77 | 23.38 |
| CDY09392 | Canola | nucleus | 26.07 | 23.28 |
| Bra026618.1-P | Field mustard | nucleus | 26.07 | 23.28 |
| Solyc04g008480.1.1 | Tomato | nucleus | 29.49 | 23.23 |
| Bra024836.1-P | Field mustard | nucleus | 25.64 | 23.17 |
| KRG90693 | Soybean | nucleus | 29.91 | 23.1 |
| CDY17617 | Canola | nucleus | 25.64 | 23.08 |
| KRH49492 | Soybean | nucleus | 29.49 | 23.0 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 20.09 | 22.82 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 28.21 | 22.6 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 19.66 | 22.44 |
| CDY17443 | Canola | nucleus | 24.79 | 21.97 |
| CDY04115 | Canola | nucleus | 24.36 | 21.03 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 19.66 | 20.54 |
| GSMUA_Achr10P... | Banana | nucleus | 17.95 | 20.1 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 18.8 | 19.47 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 17.95 | 19.18 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 20.51 | 19.12 |
| GSMUA_Achr11P... | Banana | nucleus | 19.23 | 18.99 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 26.92 | 18.98 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 21.79 | 18.75 |
| GSMUA_Achr10P... | Banana | nucleus | 21.79 | 18.35 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 18.8 | 16.79 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 26.5 | 16.4 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 18.8 | 16.36 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 28.63 | 16.34 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 19.23 | 16.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.09 | 15.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.37 | 14.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.66 | 14.15 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 20.94 | 13.84 |
| GSMUA_Achr10P... | Banana | nucleus | 30.34 | 13.71 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 20.51 | 13.52 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 20.94 | 13.0 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 20.09 | 12.53 |
| KRH36060 | Soybean | nucleus | 12.39 | 11.89 |
| Bra017425.1-P | Field mustard | nucleus | 9.83 | 11.62 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 20.09 | 11.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.23 | 11.36 |
| CDY04116 | Canola | nucleus | 8.97 | 10.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G01510_001 |
| EnsemblPlants:GSMUA_Achr11P01510_001 | EnsemblPlants:GSMUA_Achr11T01510_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0RNI1 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296D2C6 | : | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01510_001]
Coordinates
chr11:+:1039860..1041251
Molecular Weight (calculated)
26365.4 Da
IEP (calculated)
9.927
GRAVY (calculated)
-0.644
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCGRNGAV RQYTRSKVPR LRWTPDLHHC FVNAIERLGG QEKATPKLVL QLMDVRGLTI SHVKSHLQMY RSLRNDMGRQ ELQARKQSWD ENDGGADERD
101: DAGSCSYSKP THQGFQSQSM YSSTLPPLKR ARMETAATSK SWHCSHFLGE RIASQSCFDD YTPAAALGVE RGIKEEALRW QKHAALLPFH HSPKFKVSGS
201: RVEESISFKV DHKTAYPSAL PHPAKLFMPV FLAS
101: DAGSCSYSKP THQGFQSQSM YSSTLPPLKR ARMETAATSK SWHCSHFLGE RIASQSCFDD YTPAAALGVE RGIKEEALRW QKHAALLPFH HSPKFKVSGS
201: RVEESISFKV DHKTAYPSAL PHPAKLFMPV FLAS
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Arabidopsis Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.