Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026618.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY70922 | Canola | nucleus | 97.33 | 98.46 |
| CDY17617 | Canola | nucleus | 80.92 | 81.54 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 78.63 | 80.47 |
| CDY17443 | Canola | nucleus | 78.24 | 77.65 |
| CDY69675 | Canola | cytosol, nucleus | 34.35 | 77.59 |
| CDY04115 | Canola | nucleus | 77.1 | 74.54 |
| CDY04116 | Canola | nucleus | 54.2 | 69.95 |
| CDY71094 | Canola | mitochondrion | 19.85 | 65.0 |
| CDX81654 | Canola | nucleus | 58.4 | 63.22 |
| CDX82805 | Canola | nucleus | 58.02 | 62.81 |
| CDY41090 | Canola | nucleus | 58.78 | 62.35 |
| CDY45272 | Canola | nucleus | 58.78 | 62.35 |
| CDY59419 | Canola | nucleus | 56.49 | 61.67 |
| KRG89170 | Soybean | nucleus | 38.17 | 34.01 |
| KRH49492 | Soybean | nucleus | 38.93 | 34.0 |
| CDY00733 | Canola | mitochondrion, nucleus | 17.56 | 32.39 |
| CDX94559 | Canola | mitochondrion | 19.47 | 29.48 |
| CDY16660 | Canola | mitochondrion | 19.47 | 29.48 |
| KRH36060 | Soybean | nucleus | 26.72 | 28.69 |
| KRG90693 | Soybean | nucleus | 32.06 | 27.72 |
| CDX97319 | Canola | mitochondrion | 21.76 | 27.54 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 31.68 | 27.39 |
| GSMUA_Achr11P... | Banana | nucleus | 23.28 | 26.07 |
| CDY69225 | Canola | mitochondrion | 16.03 | 25.45 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 28.24 | 25.34 |
| PGSC0003DMT400075668 | Potato | nucleus | 29.39 | 25.0 |
| Solyc04g008480.1.1 | Tomato | nucleus | 28.24 | 24.92 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 22.14 | 23.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.57 | 22.71 |
| CDX74898 | Canola | nucleus | 28.63 | 21.93 |
| CDX91442 | Canola | nucleus | 28.24 | 21.14 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 22.9 | 20.98 |
| CDY42825 | Canola | nucleus | 25.19 | 20.18 |
| CDY67147 | Canola | nucleus | 25.19 | 20.18 |
| CDY52431 | Canola | nucleus | 28.24 | 19.02 |
| CDX74803 | Canola | nucleus | 27.1 | 18.49 |
| CDY07612 | Canola | nucleus | 27.1 | 18.11 |
| CDX84102 | Canola | nucleus | 18.7 | 18.08 |
| CDY54255 | Canola | nucleus | 20.61 | 18.06 |
| CDY18860 | Canola | nucleus | 27.48 | 17.69 |
| CDY68011 | Canola | nucleus | 14.12 | 17.54 |
| CDY07070 | Canola | nucleus | 27.48 | 17.31 |
| CDX78794 | Canola | nucleus | 20.61 | 17.31 |
| CDY35557 | Canola | nucleus | 21.76 | 17.07 |
| CDX93847 | Canola | nucleus | 21.37 | 16.57 |
| CDY23916 | Canola | nucleus | 16.79 | 16.54 |
| CDX93206 | Canola | nucleus | 26.34 | 16.51 |
| CDY43006 | Canola | nucleus | 21.37 | 16.47 |
| CDY01293 | Canola | nucleus | 20.99 | 15.9 |
| CDY28659 | Canola | nucleus | 17.56 | 15.08 |
| CDX70701 | Canola | nucleus | 19.47 | 13.25 |
| CDX69443 | Canola | nucleus | 19.85 | 13.23 |
| CDX78699 | Canola | nucleus | 19.47 | 13.21 |
| CDY67252 | Canola | nucleus | 19.85 | 13.2 |
| CDY38105 | Canola | nucleus | 19.47 | 12.81 |
| CDX85500 | Canola | nucleus | 19.47 | 12.78 |
| CDY02401 | Canola | nucleus | 16.79 | 7.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078F8F8 | UniProt:A0A078F8F8 | EnsemblPlants:CDY09392 | ProteinID:CDY09392 |
| ProteinID:CDY09392.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00030873001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 |
| PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002546A89 | SEG:seg |
Description
BnaA02g26180DBnaA02g26180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8F8]
Coordinates
chrLK031995:-:533601..535751
Molecular Weight (calculated)
29348.4 Da
IEP (calculated)
8.085
GRAVY (calculated)
-0.804
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAAGRNGN ENYNGVGFNG QRGGGVRPYV RSPVPRLRWT PDLHRCFVNA VDMLGGQHRA TPKLVLKMMD VKGLTISHVK SHLQMYRGSK LTLGKPEESS
101: SSSIRRQDTE EDNFHDNLSL HTRNDCLLGF HSFPLSSHSS LRGGRKKEQT SESSGDDDAD ADFLHTMNMK KTKETTMFRS HHFHKKTEKE KNTWQEHEEE
201: EDLSLSLSLN HHHWRSNGSS VSETSEAVST CSAPFIFKDC LGSSPKIDLN LDLNLSISLL GS
101: SSSIRRQDTE EDNFHDNLSL HTRNDCLLGF HSFPLSSHSS LRGGRKKEQT SESSGDDDAD ADFLHTMNMK KTKETTMFRS HHFHKKTEKE KNTWQEHEEE
201: EDLSLSLSLN HHHWRSNGSS VSETSEAVST CSAPFIFKDC LGSSPKIDLN LDLNLSISLL GS
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.