Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021038.1-P | Field mustard | plastid | 56.19 | 93.85 |
| CDX78794 | Canola | nucleus | 81.94 | 78.53 |
| CDY68011 | Canola | nucleus | 52.84 | 74.88 |
| AT4G17695.1 | Thale cress | nucleus | 77.26 | 71.74 |
| CDY71094 | Canola | mitochondrion | 13.04 | 48.75 |
| CDY69225 | Canola | mitochondrion | 22.07 | 40.0 |
| CDX84102 | Canola | nucleus | 31.44 | 34.69 |
| CDY35557 | Canola | nucleus | 38.13 | 34.13 |
| CDY43006 | Canola | nucleus | 38.46 | 33.82 |
| CDX93847 | Canola | nucleus | 38.13 | 33.73 |
| CDY01293 | Canola | nucleus | 37.79 | 32.66 |
| CDY23916 | Canola | nucleus | 27.42 | 30.83 |
| KRH05752 | Soybean | nucleus | 33.11 | 29.91 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 31.1 | 28.27 |
| Solyc04g079600.2.1 | Tomato | nucleus | 28.09 | 27.27 |
| PGSC0003DMT400030518 | Potato | nucleus | 28.09 | 27.27 |
| CDY28659 | Canola | nucleus | 27.42 | 26.89 |
| KRH51927 | Soybean | nucleus | 29.1 | 26.36 |
| CDY00733 | Canola | mitochondrion, nucleus | 12.37 | 26.06 |
| KRH61226 | Soybean | nucleus | 28.76 | 25.98 |
| CDX69443 | Canola | nucleus | 33.11 | 25.19 |
| CDY67252 | Canola | nucleus | 33.11 | 25.13 |
| CDX70701 | Canola | nucleus | 32.11 | 24.94 |
| CDX78699 | Canola | nucleus | 32.11 | 24.87 |
| CDY38105 | Canola | nucleus | 32.44 | 24.37 |
| CDX85500 | Canola | nucleus | 31.77 | 23.81 |
| CDX94559 | Canola | mitochondrion | 13.71 | 23.7 |
| CDY16660 | Canola | mitochondrion | 13.38 | 23.12 |
| CDX97319 | Canola | mitochondrion | 15.72 | 22.71 |
| CDY09392 | Canola | nucleus | 18.06 | 20.61 |
| CDY70922 | Canola | nucleus | 17.73 | 20.46 |
| CDY41090 | Canola | nucleus | 16.05 | 19.43 |
| CDY17617 | Canola | nucleus | 16.72 | 19.23 |
| CDY59419 | Canola | nucleus | 15.38 | 19.17 |
| CDY45272 | Canola | nucleus | 15.72 | 19.03 |
| CDX82805 | Canola | nucleus | 15.38 | 19.01 |
| CDX81654 | Canola | nucleus | 15.38 | 19.01 |
| CDY17443 | Canola | nucleus | 16.39 | 18.56 |
| CDX74898 | Canola | nucleus | 19.73 | 17.25 |
| CDX91442 | Canola | nucleus | 19.73 | 16.86 |
| CDY04115 | Canola | nucleus | 14.72 | 16.24 |
| CDY67147 | Canola | nucleus | 17.73 | 16.21 |
| CDY42825 | Canola | nucleus | 17.73 | 16.21 |
| CDY02401 | Canola | nucleus | 28.43 | 13.62 |
| CDX74803 | Canola | nucleus | 17.06 | 13.28 |
| CDY52431 | Canola | nucleus | 16.39 | 12.6 |
| CDY18860 | Canola | nucleus | 17.06 | 12.53 |
| CDY07612 | Canola | nucleus | 16.39 | 12.5 |
| CDY07070 | Canola | nucleus | 17.06 | 12.26 |
| CDX93206 | Canola | nucleus | 16.72 | 11.96 |
| CDY04116 | Canola | nucleus | 6.69 | 9.85 |
| CDY69675 | Canola | cytosol, nucleus | 2.68 | 6.9 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078ISY3 | UniProt:A0A078ISY3 | EnsemblPlants:CDY54255 | ProteinID:CDY54255 |
| ProteinID:CDY54255.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00013713001 | InterPro:Homeobox-like_sf |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EC2292 | SEG:seg | : | : | : |
Description
BnaCnng26550DBnaCnng26550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISY3]
Coordinates
chrLK033295:-:34208..37582
Molecular Weight (calculated)
34282.7 Da
IEP (calculated)
7.790
GRAVY (calculated)
-1.000
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFPSQPDL NLNISRRREE QDDKEQEQVE RRLVYQSQAS DSVRNASGHL IDTVKFTSNY EPTKFYHYQE HNESQDQDSR SILMVSQNQT LGHYYYSPTP
101: PFFFSEVNGQ HANPNYSYKL HHGHRRQAQP QPQRCTAKRG VRAPRMRWTT TLHAHFVRAV QLLGGHERAT PKSVLELMDV QDLTLAHVKS HLQMYRTIKS
201: TEKPTTSPGQ SDTCENGSQV KSERQARDLQ GLWNNSSSEA RLHLKANASG LDVSSNKKVD QRCESYELLS SDSSSLTWTR PETETPNLDF TLATPNLPP
101: PFFFSEVNGQ HANPNYSYKL HHGHRRQAQP QPQRCTAKRG VRAPRMRWTT TLHAHFVRAV QLLGGHERAT PKSVLELMDV QDLTLAHVKS HLQMYRTIKS
201: TEKPTTSPGQ SDTCENGSQV KSERQARDLQ GLWNNSSSEA RLHLKANASG LDVSSNKKVD QRCESYELLS SDSSSLTWTR PETETPNLDF TLATPNLPP
001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP
Arabidopsis Description
KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.