Factsheet for Solyc04g079600.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030518	Potato	nucleus	90.91	90.91
VIT_18s0001g11390.t01	Wine grape	nucleus	51.62	48.33
CDY69225	Canola	mitochondrion	25.0	46.67
KRH05752	Soybean	nucleus	49.35	45.92
AT5G42630.1	Thale cress	nucleus	37.99	42.39
CDY23916	Canola	nucleus	35.06	40.6
KRH51927	Soybean	nucleus	42.86	40.0
KRH61226	Soybean	nucleus	42.86	39.88
Bra021038.1-P	Field mustard	plastid	22.08	37.99
CDY68011	Canola	nucleus	22.08	32.23
Solyc08g076400.2.1	Tomato	nucleus	27.27	31.94
Solyc09g005030.1.1	Tomato	nucleus	14.61	30.82
CDX78794	Canola	nucleus	28.9	28.53
CDY54255	Canola	nucleus	27.27	28.09
AT4G17695.1	Thale cress	nucleus	29.22	27.95
Solyc06g066340.2.1	Tomato	nucleus	26.3	27.84
Solyc05g051060.2.1	Tomato	nucleus	25.0	27.11
Solyc08g005260.1.1	Tomato	nucleus	31.49	26.87
Bra040176.1-P	Field mustard	nucleus	27.6	26.81
Solyc12g006280.1.1	Tomato	nucleus	12.66	22.41
Solyc11g011770.1.1	Tomato	nucleus	31.17	20.78
Solyc02g080860.1.1	Tomato	nucleus	16.56	20.16
Solyc06g051060.2.1	Tomato	nucleus	15.91	19.29
Solyc10g076460.1.1	Tomato	nucleus	17.86	18.21
CDY02401	Canola	nucleus	36.69	18.11
Bra035311.1-P	Field mustard	nucleus	36.69	18.11
Solyc03g006150.2.1	Tomato	extracellular, nucleus	17.53	17.59
Solyc02g076670.2.1	Tomato	nucleus	17.86	16.27
Solyc02g080730.1.1	Tomato	nucleus	12.66	14.44
Solyc04g008480.1.1	Tomato	nucleus	13.64	14.14
Solyc02g080740.1.1	Tomato	nucleus	12.66	14.08
Solyc02g080710.1.1	Tomato	nucleus	15.58	13.37
Solyc02g080720.1.1	Tomato	nucleus	13.64	12.88
Solyc07g045000.2.1	Tomato	nucleus	6.82	11.93
Solyc02g080680.1.1	Tomato	mitochondrion	6.17	8.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0044212
InterPro:Homeobox-like_sf	UniProt:K4BV43	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12
InterPro:SANT/Myb	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc04g079600.2	EnsemblPlants:Solyc04g079600.2.1	TIGRFAMs:TIGR01557	UniParc:UPI00027671B6
SEG:seg	:	:	:	:	:

Description

Probable transcription factor KAN4 [Source:Projected from Arabidopsis thaliana (AT5G42630) UniProtKB/Swiss-Prot;Acc:Q9FJV5]

Coordinates

chr4:+:64020846..64024218

Molecular Weight (calculated)

34628.9 Da

IEP (calculated)

7.812

GRAVY (calculated)

-0.541

Length

308 amino acids

Sequence
(BLAST)

001: MTKDTLLSTV PDLSLQISLP SCILRSDQFK EAVRFDFRTD SGSSASGGSD LSHENTVFLH PEIKKAFNLP LIPTFEPTLS LGFAQVPLGT HFQYHHEHYQ
101: PQIYGREFKR SSRLISGVKR SVRAPRMRWT STLHAHFVHA VQLLGGHERA TPKSVLELMN VKDLTLAHVK SHLQMYRTVK STDKSTAKGQ GEINIFLNQN
201: NGINNGEYEK SCEEIDALSQ PSTISQNMAH MRDPSSFMPD QTNVWSHSNR ERTFANYPHI YTNMDGIETA NNSSSNDTML DLEFTLGRPS WKMGQAGSSS
301: NDLTLLKC

Best Arabidopsis Sequence Match ( AT5G42630.1 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.