Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69225 | Canola | mitochondrion | 56.39 | 90.91 |
| AT5G42630.1 | Thale cress | nucleus | 78.2 | 75.36 |
| CDY71094 | Canola | mitochondrion | 14.66 | 48.75 |
| CDY02401 | Canola | nucleus | 99.25 | 42.31 |
| Bra035311.1-P | Field mustard | nucleus | 98.87 | 42.15 |
| Solyc04g079600.2.1 | Tomato | nucleus | 40.6 | 35.06 |
| CDX84102 | Canola | nucleus | 35.71 | 35.06 |
| PGSC0003DMT400030518 | Potato | nucleus | 39.85 | 34.42 |
| CDY68011 | Canola | nucleus | 26.32 | 33.18 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 40.23 | 32.52 |
| KRH05752 | Soybean | nucleus | 39.85 | 32.02 |
| KRH51927 | Soybean | nucleus | 36.47 | 29.39 |
| CDX93847 | Canola | nucleus | 36.84 | 28.99 |
| CDY35557 | Canola | nucleus | 35.71 | 28.44 |
| KRH61226 | Soybean | nucleus | 35.34 | 28.4 |
| CDX78794 | Canola | nucleus | 33.08 | 28.21 |
| CDY43006 | Canola | nucleus | 35.71 | 27.94 |
| CDY28659 | Canola | nucleus | 31.58 | 27.54 |
| CDY00733 | Canola | mitochondrion, nucleus | 14.66 | 27.46 |
| CDY01293 | Canola | nucleus | 35.71 | 27.46 |
| CDY54255 | Canola | nucleus | 30.83 | 27.42 |
| CDX70701 | Canola | nucleus | 38.72 | 26.75 |
| CDX78699 | Canola | nucleus | 38.72 | 26.68 |
| CDY67252 | Canola | nucleus | 39.47 | 26.65 |
| CDX85500 | Canola | nucleus | 39.85 | 26.57 |
| CDX69443 | Canola | nucleus | 39.1 | 26.46 |
| CDY38105 | Canola | nucleus | 39.47 | 26.38 |
| CDY16660 | Canola | mitochondrion | 16.92 | 26.01 |
| CDX94559 | Canola | mitochondrion | 16.17 | 24.86 |
| CDX97319 | Canola | mitochondrion | 17.29 | 22.22 |
| CDY59419 | Canola | nucleus | 16.17 | 17.92 |
| CDX82805 | Canola | nucleus | 16.17 | 17.77 |
| CDX81654 | Canola | nucleus | 15.79 | 17.36 |
| CDY45272 | Canola | nucleus | 15.79 | 17.0 |
| CDY09392 | Canola | nucleus | 16.54 | 16.79 |
| CDY70922 | Canola | nucleus | 16.17 | 16.6 |
| CDY41090 | Canola | nucleus | 15.41 | 16.6 |
| CDY17443 | Canola | nucleus | 15.79 | 15.91 |
| CDY17617 | Canola | nucleus | 15.41 | 15.77 |
| CDY67147 | Canola | nucleus | 19.17 | 15.6 |
| CDY42825 | Canola | nucleus | 18.8 | 15.29 |
| CDX74898 | Canola | nucleus | 19.55 | 15.2 |
| CDX91442 | Canola | nucleus | 19.55 | 14.86 |
| CDY52431 | Canola | nucleus | 21.05 | 14.4 |
| CDY04115 | Canola | nucleus | 14.66 | 14.39 |
| CDY07612 | Canola | nucleus | 20.3 | 13.78 |
| CDX74803 | Canola | nucleus | 19.55 | 13.54 |
| CDY18860 | Canola | nucleus | 19.92 | 13.02 |
| CDY07070 | Canola | nucleus | 19.92 | 12.74 |
| CDX93206 | Canola | nucleus | 19.92 | 12.68 |
| CDY04116 | Canola | nucleus | 6.02 | 7.88 |
| CDY69675 | Canola | cytosol, nucleus | 1.5 | 3.45 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078GEU4 | UniProt:A0A078GEU4 | EnsemblPlants:CDY23916 | ProteinID:CDY23916 |
| ProteinID:CDY23916.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00024373001 | InterPro:Homeobox-like_sf |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EBD5F4 | SEG:seg | : | : | : |
Description
BnaC02g29570DBnaC02g29570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEU4]
Coordinates
chrLK032151:+:136531..138297
Molecular Weight (calculated)
30036.1 Da
IEP (calculated)
9.010
GRAVY (calculated)
-0.812
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMFESRSSV RGSNSVPDLS LQISLPNSHA EKPLHGSERS FTTSSDSGSS LSELSHENSF LKKHLLSLGF DHHHPYHHHQ RHSSNMFQPQ IYGRDFKRTS
101: SSVVSLKRSI RAPRMRWTST LHAHFVHAVQ LLGGHERATP KSVLELMNVK DLTLAHVKSH LQMYRTVKCT DKGSSGERKV EKEAEQKTED NNNNNEDADA
201: DPISPNSPSV QKTQRSPWSS TKGVSMSISQ ADPHMEIYRI TKDDVEKDHL SLEFTLGRPS WGIDHV
101: SSVVSLKRSI RAPRMRWTST LHAHFVHAVQ LLGGHERATP KSVLELMNVK DLTLAHVKSH LQMYRTVKCT DKGSSGERKV EKEAEQKTED NNNNNEDADA
201: DPISPNSPSV QKTQRSPWSS TKGVSMSISQ ADPHMEIYRI TKDDVEKDHL SLEFTLGRPS WGIDHV
001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
Arabidopsis Description
KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.