Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035311.1-P | Field mustard | nucleus | 99.84 | 99.84 |
| CDY23916 | Canola | nucleus | 42.31 | 99.25 |
| CDY69225 | Canola | mitochondrion | 24.52 | 92.73 |
| AT5G42630.1 | Thale cress | nucleus | 34.29 | 77.54 |
| CDY71094 | Canola | mitochondrion | 6.25 | 48.75 |
| Solyc04g079600.2.1 | Tomato | nucleus | 18.11 | 36.69 |
| PGSC0003DMT400030518 | Potato | nucleus | 17.79 | 36.04 |
| CDX84102 | Canola | nucleus | 15.06 | 34.69 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 17.79 | 33.74 |
| KRH05752 | Soybean | nucleus | 17.63 | 33.23 |
| CDY68011 | Canola | nucleus | 11.22 | 33.18 |
| KRH51927 | Soybean | nucleus | 15.54 | 29.39 |
| CDX93847 | Canola | nucleus | 15.87 | 29.29 |
| CDX78794 | Canola | nucleus | 14.58 | 29.17 |
| CDY35557 | Canola | nucleus | 15.38 | 28.74 |
| CDY54255 | Canola | nucleus | 13.62 | 28.43 |
| KRH61226 | Soybean | nucleus | 15.06 | 28.4 |
| CDY43006 | Canola | nucleus | 15.38 | 28.24 |
| CDY01293 | Canola | nucleus | 15.38 | 27.75 |
| CDY28659 | Canola | nucleus | 13.46 | 27.54 |
| CDY00733 | Canola | mitochondrion, nucleus | 6.25 | 27.46 |
| CDX70701 | Canola | nucleus | 16.67 | 27.01 |
| CDX78699 | Canola | nucleus | 16.67 | 26.94 |
| CDY67252 | Canola | nucleus | 16.99 | 26.9 |
| CDX85500 | Canola | nucleus | 17.15 | 26.82 |
| CDX69443 | Canola | nucleus | 16.83 | 26.72 |
| CDY38105 | Canola | nucleus | 16.99 | 26.63 |
| CDY16660 | Canola | mitochondrion | 7.21 | 26.01 |
| CDX94559 | Canola | mitochondrion | 6.89 | 24.86 |
| CDX97319 | Canola | mitochondrion | 7.37 | 22.22 |
| CDY59419 | Canola | nucleus | 6.89 | 17.92 |
| CDX82805 | Canola | nucleus | 6.89 | 17.77 |
| CDX81654 | Canola | nucleus | 6.73 | 17.36 |
| CDY67147 | Canola | nucleus | 8.97 | 17.13 |
| CDY45272 | Canola | nucleus | 6.73 | 17.0 |
| CDY42825 | Canola | nucleus | 8.81 | 16.82 |
| CDY09392 | Canola | nucleus | 7.05 | 16.79 |
| CDX74898 | Canola | nucleus | 9.13 | 16.67 |
| CDY70922 | Canola | nucleus | 6.89 | 16.6 |
| CDY41090 | Canola | nucleus | 6.57 | 16.6 |
| CDX91442 | Canola | nucleus | 9.13 | 16.29 |
| CDY17443 | Canola | nucleus | 6.73 | 15.91 |
| CDY17617 | Canola | nucleus | 6.57 | 15.77 |
| CDY52431 | Canola | nucleus | 9.46 | 15.17 |
| CDY07612 | Canola | nucleus | 9.13 | 14.54 |
| CDY04115 | Canola | nucleus | 6.25 | 14.39 |
| CDX74803 | Canola | nucleus | 8.81 | 14.32 |
| CDY18860 | Canola | nucleus | 8.81 | 13.51 |
| CDY07070 | Canola | nucleus | 8.97 | 13.46 |
| CDX93206 | Canola | nucleus | 8.97 | 13.4 |
| CDY04116 | Canola | nucleus | 2.56 | 7.88 |
| CDY69675 | Canola | cytosol, nucleus | 0.64 | 3.45 |
Protein Annotations
| EnsemblPlants:CDY02401 | EnsemblPlantsGene:GSBRNA2T00113973001 | Gene3D:1.10.10.60 | GO:A0A078EMJ5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | InterPro:SANT/Myb | PANTHER:PTHR31496 |
| PANTHER:PTHR31496:SF12 | PFAM:PF00249 | ProteinID:CDY02401 | ProteinID:CDY02401.1 | SEG:seg | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EF0715 | MapMan:15.5.2.3 | : | : | : |
Description
BnaA02g23100D
Coordinates
chrLK031934:-:594526..603758
Molecular Weight (calculated)
70632.7 Da
IEP (calculated)
6.878
GRAVY (calculated)
-0.791
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMFESRSSV RGSNSVPDLS LQISLPNSHA EKPLHGSERS FTTSSDSGSS LSELSHENSF LKKHLLSLGF DHHHPYHHHQ RHSSNMFQPQ IYGRDFKRTS
101: SSVVSLKRSI RAPRMRWTST LHAHFVHAVQ LLGGHERATP KSVLELMNVK DLTLAHVKSH LQMYRTVKCT DKRSSGERKV EKEAEQKTED NNNNNEDADA
201: DPISPNSSSV QKTQRSPWSS TKGVSMSISQ ADPHMEIYRI TKDDVEKDHL SLEFTLGRPS WGIDHVGELR RWDQGRLIDP TRRTDELDGI AQSNSPNGRV
301: GRLARSNSPN GRVGRCILAS WTMGVFAVWD PLSEALCNLP RRLKEGEESS MDGFIQHKAP TERRGSRTRK EKHIAVDDDA SYREGFTEDI LGEYLNCGVP
401: IDLDELLGSD VPASEDGSGK GPKFTKASRM VNGGLLMMNQ ALDASSQEAR MAQFRAEMAD KKIALLRDEL ERSCRCEGEL TAKEIHRAYR RGKKEMDEVM
501: KNRRAQFSYE FGEFKESYQA LGAYRECCST VGGLYLMQAP DYSFAAENVT QIRHMKERYR DFALPQIEER IWKQWEPIPV SRDTVEAETR APDETGEVNQ
601: PSVPLNVNDY SVGGSMTEYY EFDG
101: SSVVSLKRSI RAPRMRWTST LHAHFVHAVQ LLGGHERATP KSVLELMNVK DLTLAHVKSH LQMYRTVKCT DKRSSGERKV EKEAEQKTED NNNNNEDADA
201: DPISPNSSSV QKTQRSPWSS TKGVSMSISQ ADPHMEIYRI TKDDVEKDHL SLEFTLGRPS WGIDHVGELR RWDQGRLIDP TRRTDELDGI AQSNSPNGRV
301: GRLARSNSPN GRVGRCILAS WTMGVFAVWD PLSEALCNLP RRLKEGEESS MDGFIQHKAP TERRGSRTRK EKHIAVDDDA SYREGFTEDI LGEYLNCGVP
401: IDLDELLGSD VPASEDGSGK GPKFTKASRM VNGGLLMMNQ ALDASSQEAR MAQFRAEMAD KKIALLRDEL ERSCRCEGEL TAKEIHRAYR RGKKEMDEVM
501: KNRRAQFSYE FGEFKESYQA LGAYRECCST VGGLYLMQAP DYSFAAENVT QIRHMKERYR DFALPQIEER IWKQWEPIPV SRDTVEAETR APDETGEVNQ
601: PSVPLNVNDY SVGGSMTEYY EFDG
001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
Arabidopsis Description
KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.