Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16660 | Canola | mitochondrion | 90.75 | 90.75 |
| Bra029503.1-P | Field mustard | mitochondrion | 89.6 | 90.12 |
| CDY00733 | Canola | mitochondrion, nucleus | 72.83 | 88.73 |
| CDY71094 | Canola | mitochondrion | 24.86 | 53.75 |
| AT4G04555.1 | Thale cress | mitochondrion | 25.43 | 41.51 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 24.28 | 34.15 |
| AT4G04580.1 | Thale cress | nucleus | 25.43 | 26.51 |
| CDX97319 | Canola | mitochondrion | 31.21 | 26.09 |
| KRG99004 | Soybean | nucleus | 30.06 | 25.0 |
| CDY69225 | Canola | mitochondrion | 21.97 | 23.03 |
| CDY59419 | Canola | nucleus | 28.9 | 20.83 |
| CDX81654 | Canola | nucleus | 28.9 | 20.66 |
| CDX82805 | Canola | nucleus | 28.9 | 20.66 |
| Solyc02g080860.1.1 | Tomato | nucleus | 30.06 | 20.55 |
| CDY70922 | Canola | nucleus | 29.48 | 19.69 |
| CDY09392 | Canola | nucleus | 29.48 | 19.47 |
| CDY45272 | Canola | nucleus | 27.17 | 19.03 |
| CDY17617 | Canola | nucleus | 28.32 | 18.85 |
| CDY41090 | Canola | nucleus | 26.59 | 18.62 |
| CDY17443 | Canola | nucleus | 27.17 | 17.8 |
| Solyc02g080740.1.1 | Tomato | nucleus | 26.59 | 16.61 |
| CDY04115 | Canola | nucleus | 25.43 | 16.24 |
| CDY23916 | Canola | nucleus | 24.86 | 16.17 |
| Solyc02g080720.1.1 | Tomato | nucleus | 29.48 | 15.64 |
| Solyc02g080730.1.1 | Tomato | nucleus | 23.7 | 15.19 |
| CDX74898 | Canola | nucleus | 29.48 | 14.91 |
| PGSC0003DMT400042402 | Potato | nucleus | 15.03 | 14.86 |
| Solyc02g080710.1.1 | Tomato | nucleus | 30.64 | 14.76 |
| PGSC0003DMT400042480 | Potato | nucleus | 17.34 | 14.63 |
| CDX91442 | Canola | nucleus | 29.48 | 14.57 |
| CDX84102 | Canola | nucleus | 22.54 | 14.39 |
| CDY67147 | Canola | nucleus | 26.59 | 14.07 |
| CDY42825 | Canola | nucleus | 26.59 | 14.07 |
| CDY35557 | Canola | nucleus | 26.59 | 13.77 |
| CDY68011 | Canola | nucleus | 16.76 | 13.74 |
| CDY54255 | Canola | nucleus | 23.7 | 13.71 |
| CDY43006 | Canola | nucleus | 26.59 | 13.53 |
| CDX78794 | Canola | nucleus | 24.28 | 13.46 |
| CDX93847 | Canola | nucleus | 26.01 | 13.31 |
| CDX74803 | Canola | nucleus | 29.48 | 13.28 |
| CDY07612 | Canola | nucleus | 30.06 | 13.27 |
| CDY52431 | Canola | nucleus | 29.48 | 13.11 |
| CDY01293 | Canola | nucleus | 26.01 | 13.01 |
| CDY18860 | Canola | nucleus | 29.48 | 12.53 |
| CDY07070 | Canola | nucleus | 29.48 | 12.26 |
| CDX93206 | Canola | nucleus | 29.48 | 12.2 |
| KRH45989 | Soybean | nucleus | 10.4 | 11.18 |
| CDY28659 | Canola | nucleus | 19.65 | 11.15 |
| CDY04116 | Canola | nucleus | 12.72 | 10.84 |
| CDX69443 | Canola | nucleus | 24.28 | 10.69 |
| CDX78699 | Canola | nucleus | 23.7 | 10.62 |
| CDY38105 | Canola | nucleus | 24.28 | 10.55 |
| CDX85500 | Canola | nucleus | 24.28 | 10.53 |
| CDY67252 | Canola | nucleus | 23.7 | 10.41 |
| CDX70701 | Canola | nucleus | 23.12 | 10.39 |
| CDY69675 | Canola | cytosol, nucleus | 6.94 | 10.34 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 10.4 | 7.86 |
| CDY02401 | Canola | nucleus | 24.86 | 6.89 |
| Os12t0591600-01 | Rice | nucleus | 6.36 | 5.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:A0A078E1T0 | EnsemblPlants:CDX94559 | ProteinID:CDX94559 | ProteinID:CDX94559.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00157813001 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EF3663 | : |
Description
BnaC09g22770D
Coordinates
chrLK031882:-:1123630..1125856
Molecular Weight (calculated)
20301.8 Da
IEP (calculated)
10.895
GRAVY (calculated)
-0.702
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPIVRFYT KSKMPRLRWA TDLHQYFVYV VNRLGGERKA TPKKIVQAMG VKSLTLSHVK SLLQMYRNKK RRDSVQAERI MRQEMRWRQF QQHFQIYERL
101: RDATEFIQNQ RRLSDNKEKT IEFLKPSNKT MEVGHADDGL VAVSDGANVR LNSTGVLKGE EKLSLGLTLG LKY
101: RDATEFIQNQ RRLSDNKEKT IEFLKPSNKT MEVGHADDGL VAVSDGANVR LNSTGVLKGE EKLSLGLTLG LKY
001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.