Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029503.1-P | Field mustard | mitochondrion | 98.84 | 99.42 |
| CDX94559 | Canola | mitochondrion | 90.75 | 90.75 |
| CDY00733 | Canola | mitochondrion, nucleus | 72.83 | 88.73 |
| CDY71094 | Canola | mitochondrion | 26.59 | 57.5 |
| AT4G04555.1 | Thale cress | mitochondrion | 26.01 | 42.45 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 24.28 | 34.15 |
| CDX97319 | Canola | mitochondrion | 32.95 | 27.54 |
| AT4G04580.1 | Thale cress | nucleus | 26.01 | 27.11 |
| KRG99004 | Soybean | nucleus | 31.79 | 26.44 |
| CDY69225 | Canola | mitochondrion | 23.12 | 24.24 |
| CDY59419 | Canola | nucleus | 27.75 | 20.0 |
| CDX81654 | Canola | nucleus | 27.75 | 19.83 |
| CDX82805 | Canola | nucleus | 27.75 | 19.83 |
| Solyc02g080860.1.1 | Tomato | nucleus | 28.9 | 19.76 |
| CDY70922 | Canola | nucleus | 29.48 | 19.69 |
| CDY09392 | Canola | nucleus | 29.48 | 19.47 |
| CDY45272 | Canola | nucleus | 26.59 | 18.62 |
| CDY17617 | Canola | nucleus | 27.75 | 18.46 |
| CDY41090 | Canola | nucleus | 26.01 | 18.22 |
| CDY17443 | Canola | nucleus | 26.59 | 17.42 |
| CDY23916 | Canola | nucleus | 26.01 | 16.92 |
| Solyc02g080740.1.1 | Tomato | nucleus | 26.01 | 16.25 |
| CDY04115 | Canola | nucleus | 24.86 | 15.87 |
| Solyc02g080720.1.1 | Tomato | nucleus | 28.9 | 15.34 |
| Solyc02g080730.1.1 | Tomato | nucleus | 23.7 | 15.19 |
| CDY67147 | Canola | nucleus | 28.32 | 14.98 |
| CDY42825 | Canola | nucleus | 28.32 | 14.98 |
| CDX74898 | Canola | nucleus | 29.48 | 14.91 |
| Solyc02g080710.1.1 | Tomato | nucleus | 30.64 | 14.76 |
| CDX91442 | Canola | nucleus | 29.48 | 14.57 |
| CDX84102 | Canola | nucleus | 21.97 | 14.02 |
| CDY35557 | Canola | nucleus | 26.59 | 13.77 |
| CDY68011 | Canola | nucleus | 16.76 | 13.74 |
| PGSC0003DMT400042402 | Potato | nucleus | 13.87 | 13.71 |
| PGSC0003DMT400042480 | Potato | nucleus | 16.18 | 13.66 |
| CDX74803 | Canola | nucleus | 30.06 | 13.54 |
| CDY43006 | Canola | nucleus | 26.59 | 13.53 |
| CDY54255 | Canola | nucleus | 23.12 | 13.38 |
| CDX93847 | Canola | nucleus | 26.01 | 13.31 |
| CDX78794 | Canola | nucleus | 23.7 | 13.14 |
| CDY07612 | Canola | nucleus | 29.48 | 13.01 |
| CDY01293 | Canola | nucleus | 26.01 | 13.01 |
| CDY52431 | Canola | nucleus | 28.9 | 12.85 |
| CDY18860 | Canola | nucleus | 30.06 | 12.78 |
| CDY07070 | Canola | nucleus | 28.9 | 12.02 |
| CDX93206 | Canola | nucleus | 28.9 | 11.96 |
| CDY28659 | Canola | nucleus | 20.81 | 11.8 |
| CDX69443 | Canola | nucleus | 25.43 | 11.2 |
| KRH45989 | Soybean | nucleus | 10.4 | 11.18 |
| CDX78699 | Canola | nucleus | 24.86 | 11.14 |
| CDY38105 | Canola | nucleus | 25.43 | 11.06 |
| CDX85500 | Canola | nucleus | 25.43 | 11.03 |
| CDY67252 | Canola | nucleus | 24.86 | 10.91 |
| CDX70701 | Canola | nucleus | 24.28 | 10.91 |
| CDY04116 | Canola | nucleus | 12.14 | 10.34 |
| CDY69675 | Canola | cytosol, nucleus | 5.78 | 8.62 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 10.98 | 8.3 |
| CDY02401 | Canola | nucleus | 26.01 | 7.21 |
| Os12t0591600-01 | Rice | nucleus | 5.78 | 5.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078FQB9 | UniProt:A0A078FQB9 | EnsemblPlants:CDY16660 | ProteinID:CDY16660 |
| ProteinID:CDY16660.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00094499001 | InterPro:Homeobox-like_sf |
| InterPro:Myb_dom_plants | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EDAEE3 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g20380DBnaA09g20380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQB9]
Coordinates
chrLK032066:+:336182..338263
Molecular Weight (calculated)
20150.4 Da
IEP (calculated)
10.829
GRAVY (calculated)
-0.779
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MENPIVRFYT KSKMPRLRWA SDLHHYFVYV VNQLGGERKA TPKKIVQAMG VKSLTLSHVK SHLQMYRNKK RRDSVQAERR MRQEMRWRQS QQHLQIYERL
101: RDATEFMQNQ RRLSDNKEKT IAFLKPSNKT MEVGHADDGV VAAGYGANVR LDSTGVLKGE EKLSLGLTLG LNY
101: RDATEFMQNQ RRLSDNKEKT IAFLKPSNKT MEVGHADDGV VAAGYGANVR LDSTGVLKGE EKLSLGLTLG LNY
001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.