Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17617 | Canola | nucleus | 92.24 | 41.15 |
| CDY04116 | Canola | nucleus | 70.69 | 40.39 |
| CDY70922 | Canola | nucleus | 76.72 | 34.36 |
| CDY09392 | Canola | nucleus | 77.59 | 34.35 |
| CDY17443 | Canola | nucleus | 68.97 | 30.3 |
| CDY04115 | Canola | nucleus | 70.69 | 30.26 |
| CDX81654 | Canola | nucleus | 51.72 | 24.79 |
| CDY41090 | Canola | nucleus | 52.59 | 24.7 |
| CDY59419 | Canola | nucleus | 50.86 | 24.58 |
| CDX82805 | Canola | nucleus | 50.86 | 24.38 |
| CDY45272 | Canola | nucleus | 51.72 | 24.29 |
| TraesCSU01G097800.1 | Wheat | plastid | 14.66 | 8.72 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 17.24 | 8.1 |
| Os06t0670300-01 | Rice | nucleus | 16.38 | 7.42 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 15.52 | 7.35 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 15.52 | 7.32 |
| CDX94559 | Canola | mitochondrion | 10.34 | 6.94 |
| OQU76857 | Sorghum | nucleus | 14.66 | 6.64 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 13.79 | 6.5 |
| TraesCS7A01G469900.1 | Wheat | nucleus | 13.79 | 6.43 |
| TraesCS7D01G457300.1 | Wheat | nucleus | 13.79 | 6.4 |
| TraesCS7D01G457400.1 | Wheat | nucleus | 13.79 | 6.37 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 12.93 | 6.25 |
| Solyc07g045000.2.1 | Tomato | nucleus | 9.48 | 6.25 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 12.93 | 6.0 |
| TraesCS7A01G470100.1 | Wheat | nucleus | 12.93 | 5.95 |
| KRH14524 | Soybean | nucleus | 9.48 | 5.88 |
| CDY16660 | Canola | mitochondrion | 8.62 | 5.78 |
| CDX74898 | Canola | nucleus | 16.38 | 5.56 |
| PGSC0003DMT400002410 | Potato | nucleus | 10.34 | 5.56 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 5.17 | 5.5 |
| CDX74803 | Canola | nucleus | 18.1 | 5.47 |
| CDY18860 | Canola | nucleus | 18.97 | 5.41 |
| CDY52431 | Canola | nucleus | 18.1 | 5.4 |
| KRH73595 | Soybean | nucleus | 9.48 | 5.16 |
| CDX91442 | Canola | nucleus | 15.52 | 5.14 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 8.62 | 4.85 |
| CDY07612 | Canola | nucleus | 16.38 | 4.85 |
| CDY07070 | Canola | nucleus | 17.24 | 4.81 |
| Zm00001d020382_P001 | Maize | nucleus, plastid | 4.31 | 4.67 |
| CDX93206 | Canola | nucleus | 16.38 | 4.55 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 5.17 | 3.8 |
| CDY42825 | Canola | nucleus | 10.34 | 3.67 |
| CDY00733 | Canola | mitochondrion, nucleus | 4.31 | 3.52 |
| CDX97319 | Canola | mitochondrion | 6.03 | 3.38 |
| CDY67147 | Canola | nucleus | 9.48 | 3.36 |
| Solyc12g006280.1.1 | Tomato | nucleus | 4.31 | 2.87 |
| CDY35557 | Canola | nucleus | 7.76 | 2.69 |
| CDY54255 | Canola | nucleus | 6.9 | 2.68 |
| CDX78794 | Canola | nucleus | 6.9 | 2.56 |
| CDX93847 | Canola | nucleus | 6.9 | 2.37 |
| CDY43006 | Canola | nucleus | 6.9 | 2.35 |
| CDY01293 | Canola | nucleus | 6.9 | 2.31 |
| CDY69225 | Canola | mitochondrion | 2.59 | 1.82 |
| CDY23916 | Canola | nucleus | 3.45 | 1.5 |
| CDX69443 | Canola | nucleus | 4.31 | 1.27 |
| CDY67252 | Canola | nucleus | 4.31 | 1.27 |
| CDY71094 | Canola | mitochondrion | 0.86 | 1.25 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 0.86 | 1.11 |
| CDX70701 | Canola | nucleus | 3.45 | 1.04 |
| CDX78699 | Canola | nucleus | 3.45 | 1.04 |
| CDY38105 | Canola | nucleus | 3.45 | 1.01 |
| CDX85500 | Canola | nucleus | 3.45 | 1.0 |
| CDX84102 | Canola | nucleus | 1.72 | 0.74 |
| CDY28659 | Canola | nucleus | 1.72 | 0.66 |
| CDY02401 | Canola | nucleus | 3.45 | 0.64 |
| CDY68011 | Canola | nucleus | 0.0 | 0.0 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 0.0 | 0.0 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY69675 | EnsemblPlantsGene:GSBRNA2T00091478001 | ProteinID:CDY69675 | ProteinID:CDY69675.1 | SEG:seg | UniParc:UPI0004EDDF3B |
| UniProt:A0A078JTA4 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng64720DBnaCnng64720D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JTA4]
Coordinates
chrLK040031:-:2036..2802
Molecular Weight (calculated)
12717.4 Da
IEP (calculated)
5.138
GRAVY (calculated)
-0.797
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: GGRREYQTSQ SGGGGDDDDF LHIINMEKTR ETTPFPSHHC HKTTEKEKNT GQEQEGEDLS LSLSLNHHQW RSNGSSVSET SEAVSTCSAP FVFKDCFASS
101: PKIDLNLTLS VSLLSS
101: PKIDLNLTLS VSLLSS
001: MMDVKGLTIS HVKSHLQMYR GGSKLTLEKP EESSSSSIRR RQDSEEDYYL HDNLSLHTRN DCLLGFHSFP LSSHSSFRGG GGGRTKEQQT SESGGYDDDA
101: DFLHIKKMND TTTFLSHHFP KGTEEWREQE HEEEEEDLSL SLSLNHHHWR SNGSSVVSET SEAAVSTCSA PFVSKDCFGS SKIDLNLSIS LLGS
101: DFLHIKKMND TTTFLSHHFP KGTEEWREQE HEEEEEDLSL SLSLNHHHWR SNGSSVVSET SEAAVSTCSA PFVSKDCFGS SKIDLNLSIS LLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.