Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76857 | Sorghum | nucleus | 67.97 | 67.97 |
| Zm00001d046981_P001 | Maize | nucleus | 53.52 | 64.93 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 17.97 | 63.89 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 16.8 | 57.33 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 51.95 | 54.29 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 51.95 | 53.85 |
| Zm00001d036638_P001 | Maize | nucleus | 55.86 | 53.76 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 50.39 | 53.75 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 51.17 | 53.25 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 51.17 | 53.25 |
| TraesCS7D01G457400.1 | Wheat | nucleus | 50.78 | 51.79 |
| TraesCS7A01G470100.1 | Wheat | nucleus | 50.78 | 51.59 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 50.0 | 51.2 |
| TraesCS7A01G469900.1 | Wheat | nucleus | 49.61 | 51.0 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 21.48 | 50.46 |
| TraesCS7D01G457300.1 | Wheat | nucleus | 49.22 | 50.4 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 17.19 | 48.89 |
| HORVU7Hr1G107670.1 | Barley | nucleus | 47.27 | 48.79 |
| HORVU7Hr1G107680.8 | Barley | nucleus | 48.83 | 47.89 |
| TraesCSU01G097800.1 | Wheat | plastid | 33.59 | 44.1 |
| HORVU7Hr1G107630.5 | Barley | mitochondrion | 42.97 | 40.59 |
| KRH14524 | Soybean | nucleus | 25.0 | 34.22 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 27.34 | 33.98 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 20.31 | 32.91 |
| KRH73595 | Soybean | nucleus | 26.17 | 31.46 |
| Solyc12g006280.1.1 | Tomato | nucleus | 19.92 | 29.31 |
| PGSC0003DMT400002410 | Potato | nucleus | 19.92 | 23.61 |
| Os11t0106100-00 | Rice | nucleus | 19.53 | 23.47 |
| Os04t0566600-01 | Rice | extracellular | 27.73 | 23.2 |
| Os03t0624000-00 | Rice | nucleus | 11.72 | 16.48 |
| Solyc07g045000.2.1 | Tomato | nucleus | 11.33 | 16.48 |
| CDY69675 | Canola | cytosol, nucleus | 7.42 | 16.38 |
| Os12t0105600-01 | Rice | nucleus | 19.92 | 16.24 |
| Os08t0160300-00 | Rice | nucleus | 18.75 | 13.91 |
| Os03t0766500-01 | Rice | mitochondrion | 19.92 | 13.01 |
| Os09t0395300-01 | Rice | nucleus | 17.97 | 12.2 |
| Os06t0543200-01 | Rice | nucleus | 25.39 | 11.97 |
| Os02t0241200-00 | Rice | nucleus | 25.0 | 11.74 |
| Os02t0696900-00 | Rice | plasma membrane | 15.62 | 10.84 |
| Os08t0426866-00 | Rice | nucleus | 17.97 | 9.83 |
| Os12t0591600-01 | Rice | nucleus | 3.52 | 4.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:4341803 | ProteinID:BAD45453.1 | ProteinID:BAD45989.1 | ProteinID:BAF20242.1 |
| ProteinID:BAS99069.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlantsGene:Os06g0670300 | EnsemblPlants:Os06t0670300-01 | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF2 | UniProt:Q653M8 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI000043A2C5 | RefSeq:XP_015641452.1 | SEG:seg | : | : | : |
Description
Homeodomain-like containing protein. (Os06t0670300-01)
Coordinates
chr6:+:27777556..27780675
Molecular Weight (calculated)
28509.2 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.635
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGFERRGVR QYNRSEVPRM RWTEEMHRQF VEAVECLGGQ DEATPKRILQ LMGVKGVSIS HIKSHLQMYR SGSSNSNHPV SLQKLTSATV NNISKREFVN
101: SEDRCIYASG DRNTASSDKN TYTILRCGRS SMPSIEEIFR NWEQTRGRLL PWNSNVITTE QATTRASRQT TNYSKPLKQL TDCDLTLSIG QLWDDAAGSD
201: ADGSSTISEE VAAPSRDEAF VSSADDHFAA AAAKKESNML TTDLNLDLTI SSSWLS
101: SEDRCIYASG DRNTASSDKN TYTILRCGRS SMPSIEEIFR NWEQTRGRLL PWNSNVITTE QATTRASRQT TNYSKPLKQL TDCDLTLSIG QLWDDAAGSD
201: ADGSSTISEE VAAPSRDEAF VSSADDHFAA AAAKKESNML TTDLNLDLTI SSSWLS
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.