Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046981_P001 | Maize | nucleus | 72.27 | 87.68 |
| Zm00001d036638_P001 | Maize | nucleus | 78.91 | 75.94 |
| Os06t0670300-01 | Rice | nucleus | 67.97 | 67.97 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 18.36 | 65.28 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 56.64 | 59.18 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 55.47 | 57.72 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 55.47 | 57.49 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 16.8 | 57.33 |
| TraesCS7D01G457400.1 | Wheat | nucleus | 53.12 | 54.18 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 51.95 | 54.06 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 52.34 | 53.6 |
| TraesCS7A01G469900.1 | Wheat | nucleus | 51.95 | 53.41 |
| TraesCS7A01G470100.1 | Wheat | nucleus | 52.34 | 53.17 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 49.22 | 52.5 |
| TraesCS7D01G457300.1 | Wheat | nucleus | 51.17 | 52.4 |
| HORVU7Hr1G107670.1 | Barley | nucleus | 49.61 | 51.21 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 17.58 | 50.0 |
| HORVU7Hr1G107680.8 | Barley | nucleus | 50.78 | 49.81 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 21.09 | 49.54 |
| TraesCSU01G097800.1 | Wheat | plastid | 34.38 | 45.13 |
| HORVU7Hr1G107630.5 | Barley | mitochondrion | 44.92 | 42.44 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 30.08 | 37.38 |
| KRH14524 | Soybean | nucleus | 25.78 | 35.29 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 20.31 | 32.91 |
| KRH73595 | Soybean | nucleus | 26.17 | 31.46 |
| Solyc12g006280.1.1 | Tomato | nucleus | 19.92 | 29.31 |
| PGSC0003DMT400002410 | Potato | nucleus | 20.31 | 24.07 |
| KXG31083 | Sorghum | nucleus | 26.56 | 21.25 |
| EES11274 | Sorghum | nucleus | 23.83 | 19.55 |
| KXG40258 | Sorghum | nucleus | 27.73 | 17.49 |
| Solyc07g045000.2.1 | Tomato | nucleus | 11.33 | 16.48 |
| EES15503 | Sorghum | nucleus | 22.66 | 15.85 |
| EES09087 | Sorghum | nucleus | 22.27 | 15.7 |
| CDY69675 | Canola | cytosol, nucleus | 6.64 | 14.66 |
| EER93393 | Sorghum | mitochondrion, plastid | 20.31 | 13.61 |
| EES13398 | Sorghum | nucleus | 19.53 | 13.3 |
| KXG30956 | Sorghum | cytosol, nucleus, peroxisome, plastid | 19.14 | 13.24 |
| OQU76531 | Sorghum | nucleus | 25.39 | 12.7 |
| EES04827 | Sorghum | nucleus | 25.0 | 12.05 |
| EER91215 | Sorghum | nucleus | 18.36 | 11.01 |
| KXG25180 | Sorghum | nucleus | 18.75 | 10.11 |
| OQU79478 | Sorghum | nucleus | 17.19 | 9.52 |
| KXG35581 | Sorghum | nucleus | 18.75 | 9.18 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:8083194 | UniProt:A0A1W0VU88 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlants:OQU76857 |
| ProteinID:OQU76857 | ProteinID:OQU76857.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF2 |
| InterPro:SANT/Myb | EnsemblPlantsGene:SORBI_3010G224200 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A88F48 | RefSeq:XP_002437427.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:56596202..56600159
Molecular Weight (calculated)
28219.9 Da
IEP (calculated)
8.487
GRAVY (calculated)
-0.673
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGFERKGVR QYNRSEVPRM RWTEELHRQF VEAVECLGGQ DEATPKRILQ LMGVKGVSIS HIKSHLQMYR SSSSSSSSST HQSSLQKLTS STAASNSKRV
101: FLSREDHCAY ASQDGNTPAP SDKNIYTTML RGCSHSSPYQ IPPSLEEVFR SCWEQRRGRA PWNSNVLTTE KAIRPGHTNN KKPAEKQHTG CDLTLSIGLW
201: EDASSDDADG SSSISEELLL PAPAAGARRV AAAVKEEESK PAALNLDLTI SSSWLA
101: FLSREDHCAY ASQDGNTPAP SDKNIYTTML RGCSHSSPYQ IPPSLEEVFR SCWEQRRGRA PWNSNVLTTE KAIRPGHTNN KKPAEKQHTG CDLTLSIGLW
201: EDASSDDADG SSSISEELLL PAPAAGARRV AAAVKEEESK PAALNLDLTI SSSWLA
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.