Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G372200.1 | Wheat | nucleus | 69.35 | 73.88 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 68.2 | 72.36 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 67.43 | 71.26 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 66.67 | 70.73 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 63.6 | 69.17 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 18.77 | 65.33 |
| TraesCSU01G097800.1 | Wheat | plastid | 44.44 | 59.49 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 16.09 | 58.33 |
| HORVU7Hr1G107670.1 | Barley | nucleus | 54.79 | 57.66 |
| HORVU7Hr1G107630.5 | Barley | mitochondrion | 59.0 | 56.83 |
| OQU76857 | Sorghum | nucleus | 49.81 | 50.78 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 17.24 | 50.0 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 20.69 | 49.54 |
| Os06t0670300-01 | Rice | nucleus | 47.89 | 48.83 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 26.05 | 33.01 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 19.16 | 31.65 |
| KRH14524 | Soybean | nucleus | 21.46 | 29.95 |
| KRH73595 | Soybean | nucleus | 22.99 | 28.17 |
| Solyc12g006280.1.1 | Tomato | nucleus | 18.77 | 28.16 |
| PGSC0003DMT400002410 | Potato | nucleus | 21.07 | 25.46 |
| HORVU1Hr1G052170.2 | Barley | nucleus | 21.84 | 22.27 |
| HORVU0Hr1G016420.1 | Barley | mitochondrion | 18.77 | 20.76 |
| HORVU6Hr1G064920.1 | Barley | mitochondrion | 18.77 | 20.76 |
| HORVU2Hr1G095530.2 | Barley | nucleus | 22.99 | 20.0 |
| HORVU4Hr1G082560.1 | Barley | plastid | 26.44 | 18.06 |
| HORVU7Hr1G070420.2 | Barley | nucleus | 11.49 | 17.96 |
| Solyc07g045000.2.1 | Tomato | nucleus | 11.88 | 17.61 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 27.97 | 15.21 |
| HORVU6Hr1G000410.1 | Barley | nucleus | 18.77 | 14.89 |
| HORVU5Hr1G017410.10 | Barley | nucleus | 17.62 | 13.37 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 25.29 | 12.92 |
| HORVU4Hr1G012040.5 | Barley | nucleus | 18.01 | 12.6 |
| HORVU5Hr1G097900.4 | Barley | mitochondrion, plastid | 18.01 | 12.24 |
| HORVU5Hr1G060310.22 | Barley | nucleus | 18.01 | 10.59 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.2 | UniProt:A0A287XQF4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU7Hr1G107680 | EnsemblPlants:HORVU7Hr1G107680.8 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF2 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000B464EA7 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:623563321..623565830
Molecular Weight (calculated)
29270.1 Da
IEP (calculated)
7.086
GRAVY (calculated)
-0.657
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGFERRGVR QYNRSEEPRM RWTEELHRQF IDAVDCLGGQ DEATPKRILQ LMGAKGVNIS HIKSHLQLLD QFLLFQNMTH LQMYRSSSRS STTNSSPHAS
101: VNRRQDHCVN GNDMTTTASD GVNAPSYTVF RRHHCSTLSA CQIPSIEEVF RSWEQSRGRL SWSSYGMLIA PNKAASWSCH ADSKTHQKKQ QTVTGCELTL
201: SIGRWEEEEE ASSEADISST TTEVSAAPAR GRGSSDHPCP DAALDLDLDL NLKLAISSSW L
101: VNRRQDHCVN GNDMTTTASD GVNAPSYTVF RRHHCSTLSA CQIPSIEEVF RSWEQSRGRL SWSSYGMLIA PNKAASWSCH ADSKTHQKKQ QTVTGCELTL
201: SIGRWEEEEE ASSEADISST TTEVSAAPAR GRGSSDHPCP DAALDLDLDL NLKLAISSSW L
001: MGRCGRSNDG VIGGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYKAT PKLVLKIMDV KGLTISHVKS HLQMYRGSRI TLLGKPEESS SPSSRRRRRQ
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
Arabidopsis Description
Putative Myb family transcription factor At1g14600 [Source:UniProtKB/Swiss-Prot;Acc:Q700D9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.