Factsheet for HORVU1Hr1G052170.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G205800.1	Wheat	nucleus	92.58	67.33
TraesCS1A01G202500.1	Wheat	nucleus	92.19	66.86
TraesCS1B01G216600.1	Wheat	nucleus	90.62	65.91
HORVU7Hr1G107500.1	Barley	mitochondrion	12.11	41.33
HORVU4Hr1G082560.1	Barley	plastid	46.88	31.41
HORVU7Hr1G107670.1	Barley	nucleus	21.88	22.58
HORVU7Hr1G107680.8	Barley	nucleus	22.27	21.84
HORVU6Hr1G064920.1	Barley	mitochondrion	17.58	19.07
HORVU0Hr1G016420.1	Barley	mitochondrion	17.58	19.07
HORVU2Hr1G095530.2	Barley	nucleus	20.7	17.67
HORVU7Hr1G107630.5	Barley	mitochondrion	17.19	16.24
HORVU7Hr1G070420.2	Barley	nucleus	9.77	14.97
HORVU6Hr1G000410.1	Barley	nucleus	18.36	14.29
HORVU5Hr1G017410.10	Barley	nucleus	17.58	13.08
HORVU6Hr1G019650.5	Barley	nucleus	23.05	12.29
HORVU7Hr1G080530.3	Barley	nucleus	23.83	11.94
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	17.58	11.72
HORVU4Hr1G012040.5	Barley	nucleus	16.8	11.53
HORVU5Hr1G060310.22	Barley	nucleus	17.19	9.91

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A287FKD2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU1Hr1G052170	EnsemblPlants:HORVU1Hr1G052170.2	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF41	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI000B472011	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:386673457..386677279

Molecular Weight (calculated)

28340.7 Da

IEP (calculated)

9.294

GRAVY (calculated)

-0.819

Length

256 amino acids

Sequence
(BLAST)

001: MTMAAGRDHQ RVEGVRQYNR SKVPRLRWTP DLHRCFVHAI HNLGGQYRAT PKRVLQLMGV AGLTISHVKS HLQMYRNMRG NDLDMMQGIQ QMDQQHTFAG
101: GMEVWTDMQQ VHHHTEYCDG PCCRCHSPKH TKGSLLHHPQ LKRPSGMETT QEAGASPQKN SVRGQGICER DVTSGAYCLA AAGQAYYYYA HCMQTTTTHE
201: QGHHLPPRSR TWQRTPAAGG GGEQSARPGC TLAPREPERD LAAPRRGGGG GGGGEV

Best Arabidopsis Sequence Match ( AT2G02060.1 )
(BLAST)

001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.