Factsheet for HORVU4Hr1G082560.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G323600.1	Wheat	nucleus	79.58	79.37
TraesCS5A01G496100.1	Wheat	nucleus	76.18	76.98
TraesCS4D01G320400.1	Wheat	nucleus	78.27	69.7
Zm00001d048448_P001	Maize	nucleus	19.63	64.66
HORVU1Hr1G052170.2	Barley	nucleus	31.41	46.88
KXG40258	Sorghum	nucleus	47.64	44.83
Zm00001d027492_P001	Maize	mitochondrion	45.55	40.09
HORVU7Hr1G107500.1	Barley	mitochondrion	7.59	38.67
HORVU7Hr1G107670.1	Barley	nucleus	17.8	27.42
HORVU7Hr1G107680.8	Barley	nucleus	18.06	26.44
HORVU2Hr1G095530.2	Barley	nucleus	18.59	23.67
HORVU7Hr1G070420.2	Barley	nucleus	9.69	22.16
HORVU7Hr1G107630.5	Barley	mitochondrion	15.18	21.4
HORVU0Hr1G016420.1	Barley	mitochondrion	12.57	20.34
HORVU6Hr1G064920.1	Barley	mitochondrion	12.57	20.34
HORVU6Hr1G000410.1	Barley	nucleus	14.4	16.72
HORVU5Hr1G017410.10	Barley	nucleus	14.92	16.57
HORVU4Hr1G012040.5	Barley	nucleus	15.71	16.09
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	15.45	15.36
HORVU7Hr1G080530.3	Barley	nucleus	19.9	14.87
HORVU6Hr1G019650.5	Barley	nucleus	18.59	14.79
HORVU5Hr1G060310.22	Barley	nucleus	15.45	13.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G082560
EnsemblPlants:HORVU4Hr1G082560.1	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0X3Y8	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI00029545A3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:622605650..622610981

Molecular Weight (calculated)

40218.7 Da

IEP (calculated)

8.577

GRAVY (calculated)

-0.436

Length

382 amino acids

Sequence
(BLAST)

001: MTMAPRTASR EANCAGAGGV RQYNRSKVPR LRWTSALHRC FVHAIHSLGG HDRATPKRVL QLMGVGGLTI SHVKSHLQMY RNMKNDLGMQ GRMQPAVQQS
101: SGQEGHTRSA GGCMEVCTDE DEEWHVPGYD SPMPRKESTP LPLHPQLKRR AGESEPGTGT REEASASPTS LLRVQGGGGI CESSSSHAPA AGGNYYLRMN
201: MNMVQEQAVL QAAPVAAARL VEPRGLTALG IQQKQRQRRG PWMPARLHGG GDGEPAASEL KFLGFLVAPG HPPRAASRCD GHPFEVGTPP TRPAAHGASL
301: TDGAHPCRLE PPGNLVDGGF TNPMSTTVAG ERDGGCSLSL SLALALCPAA DGSLLSSSLS SSSSSSCGSR ISLDLSLSTL DS

Best Arabidopsis Sequence Match ( AT4G04605.1 )
(BLAST)

001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA

Arabidopsis Description

Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.