Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0766500-01 | Rice | mitochondrion | 16.5 | 8.42 |
| AT4G04580.1 | Thale cress | nucleus | 5.5 | 6.63 |
| CDX94559 | Canola | mitochondrion | 5.5 | 6.36 |
| Os09t0395300-01 | Rice | nucleus | 11.0 | 5.84 |
| Bra029503.1-P | Field mustard | mitochondrion | 5.0 | 5.81 |
| CDY16660 | Canola | mitochondrion | 5.0 | 5.78 |
| Os11t0106100-00 | Rice | nucleus | 5.5 | 5.16 |
| PGSC0003DMT400042402 | Potato | nucleus | 4.5 | 5.14 |
| CDY00733 | Canola | mitochondrion, nucleus | 3.5 | 4.93 |
| Os12t0105600-01 | Rice | nucleus | 7.5 | 4.78 |
| Os04t0566600-01 | Rice | extracellular | 7.0 | 4.58 |
| AT4G04605.1 | Thale cress | mitochondrion | 5.0 | 4.55 |
| Os08t0426866-00 | Rice | nucleus | 10.5 | 4.49 |
| Solyc02g080860.1.1 | Tomato | nucleus | 5.5 | 4.35 |
| CDX97319 | Canola | mitochondrion | 4.5 | 4.35 |
| KRH45989 | Soybean | nucleus | 3.5 | 4.35 |
| Os08t0160300-00 | Rice | nucleus | 7.0 | 4.06 |
| KRH36473 | Soybean | nucleus | 5.5 | 3.89 |
| KRH11454 | Soybean | nucleus | 5.5 | 3.83 |
| Os06t0670300-01 | Rice | nucleus | 4.5 | 3.52 |
| Os06t0543200-01 | Rice | nucleus | 9.5 | 3.5 |
| PGSC0003DMT400042480 | Potato | nucleus | 3.5 | 3.41 |
| Solyc02g080720.1.1 | Tomato | nucleus | 5.5 | 3.37 |
| Os02t0696900-00 | Rice | plasma membrane | 6.0 | 3.25 |
| KRG99004 | Soybean | nucleus | 3.0 | 2.88 |
| AT4G04555.1 | Thale cress | mitochondrion | 1.5 | 2.83 |
| Solyc02g080710.1.1 | Tomato | nucleus | 5.0 | 2.79 |
| Os02t0241200-00 | Rice | nucleus | 7.0 | 2.57 |
| CDY71094 | Canola | mitochondrion | 1.0 | 2.5 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 2.5 | 2.18 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 1.0 | 1.63 |
| Solyc02g080730.1.1 | Tomato | nucleus | 2.0 | 1.48 |
| Solyc02g080740.1.1 | Tomato | nucleus | 2.0 | 1.44 |
| Bra018498.1-P | Field mustard | mitochondrion | 0.5 | 1.41 |
| Os03t0624000-00 | Rice | nucleus | 0.5 | 0.55 |
Protein Annotations
| EnsemblPlants:Os12t0591600-01 | EnsemblPlantsGene:Os12g0591600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | ProteinID:BAF30189.1 |
| ProteinID:BAT17885.1 | SEG:seg | UniParc:UPI0000DD9F46 | UniProt:Q0IM76 | MapMan:35.2 | : |
Description
Conserved hypothetical protein. (Os12t0591600-01)
Coordinates
chr12:-:24793181..24796415
Molecular Weight (calculated)
22003.5 Da
IEP (calculated)
6.628
GRAVY (calculated)
-0.734
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHMRIDLYC RKSQSPGEQQ LQDLQSGWPP HYLASSESDH LLMEQRLMQE IWKGAAAAAA HDHHDQEAAT AAALHHDQHV RRLDHIVAGR PPPPPASSSS
101: GGGGDTMASS LDWLLASRRQ EQHKYGDRHY DDDDGGYYTA AHRGQAAAAM SAAAAAASGV VKDRRPSLEM SLGRQGWEIS MEQRSSVEYS SKELTLLKCL
101: GGGGDTMASS LDWLLASRRQ EQHKYGDRHY DDDDGGYYTA AHRGQAAAAM SAAAAAASGV VKDRRPSLEM SLGRQGWEIS MEQRSSVEYS SKELTLLKCL
001: MAIPQRNKRK ARSSPERLTQ PPELPHNSDV PSSSSSSAAD NFFSWSTKQF AFPPGYRFVP KDQELIFHYL KPFSQGNKCS LLNVPIHRVN IYESNPQHLS
101: EKYEKGNDKD WFYISERTKT GKAGRSNKRV DNGGYWSATV AAQKINAGNG IVGYKTSLEY YVGKQSNSVK GDWLMQEYWF ESSDDNNNEK VDHALCKIYL
201: TPAAAKKKKA EEAENEKLKK EEDVEQLDLN QPDQLQLQQP HDIVYQPQYC LLPEHHQPQP FPDNFSELIS FQQQPVMIPD DFEDFLAEFT KPHSLDGDEE
301: FNNYGLFEGF FDTEGMIKH
101: EKYEKGNDKD WFYISERTKT GKAGRSNKRV DNGGYWSATV AAQKINAGNG IVGYKTSLEY YVGKQSNSVK GDWLMQEYWF ESSDDNNNEK VDHALCKIYL
201: TPAAAKKKKA EEAENEKLKK EEDVEQLDLN QPDQLQLQQP HDIVYQPQYC LLPEHHQPQP FPDNFSELIS FQQQPVMIPD DFEDFLAEFT KPHSLDGDEE
301: FNNYGLFEGF FDTEGMIKH
Arabidopsis Description
anac064NAC064 [Source:UniProtKB/TrEMBL;Acc:A0A178V9P9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.