Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G04580.1 | Thale cress | nucleus | 66.04 | 42.17 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 40.57 | 34.96 |
| CDY00733 | Canola | mitochondrion, nucleus | 42.45 | 31.69 |
| Bra029503.1-P | Field mustard | mitochondrion | 42.45 | 26.16 |
| CDY16660 | Canola | mitochondrion | 42.45 | 26.01 |
| CDX94559 | Canola | mitochondrion | 41.51 | 25.43 |
| AT4G04605.1 | Thale cress | mitochondrion | 46.23 | 22.27 |
| KRG99004 | Soybean | nucleus | 35.85 | 18.27 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 43.4 | 17.97 |
| Solyc02g080860.1.1 | Tomato | nucleus | 41.51 | 17.39 |
| AT1G14600.1 | Thale cress | nucleus | 41.51 | 17.25 |
| AT2G42660.1 | Thale cress | nucleus | 39.62 | 16.47 |
| Solyc02g080740.1.1 | Tomato | nucleus | 38.68 | 14.8 |
| Solyc02g080730.1.1 | Tomato | nucleus | 35.85 | 14.07 |
| AT5G42630.1 | Thale cress | nucleus | 33.02 | 12.68 |
| AT2G38300.1 | Thale cress | nucleus | 40.57 | 12.65 |
| Solyc02g080720.1.1 | Tomato | nucleus | 35.85 | 11.66 |
| AT4G17695.1 | Thale cress | nucleus | 34.91 | 11.49 |
| AT2G40260.1 | Thale cress | nucleus | 43.4 | 11.22 |
| Solyc02g080710.1.1 | Tomato | nucleus | 35.85 | 10.59 |
| AT1G32240.1 | Thale cress | nucleus | 36.79 | 10.05 |
| AT5G16560.1 | Thale cress | nucleus | 34.91 | 9.18 |
| PGSC0003DMT400042480 | Potato | nucleus | 16.98 | 8.78 |
| PGSC0003DMT400042402 | Potato | nucleus | 13.21 | 8.0 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 16.98 | 7.86 |
| KRH45989 | Soybean | nucleus | 5.66 | 3.73 |
| Os12t0591600-01 | Rice | nucleus | 2.83 | 1.5 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:28719571 | MapMan:35.1 | UniProt:A0A1P8B772 | ProteinID:ANM67442.1 | ArrayExpress:AT4G04555 |
| EnsemblPlantsGene:AT4G04555 | EnsemblPlants:AT4G04555.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | RefSeq:NP_001329272.1 | PFAM:PF00249 |
| PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0008494D38 | SEG:seg | : | : | : | : |
Description
Myb family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B772]
Coordinates
chr4:-:2265647..2266799
Molecular Weight (calculated)
13206.3 Da
IEP (calculated)
11.496
GRAVY (calculated)
-0.902
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGRIVRSYT RSKVPHWRWT DDLNLLFIQV VELLGGERRA TPKVILDFMD VKNLPISHVK SHLQMYRNKK KEESRKERRM MREMSRRQSQ QYIQIYERYN
101: WILVRR
101: WILVRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.