Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g080860.1.1 | Tomato | nucleus | 84.57 | 58.5 |
| PGSC0003DMT400042480 | Potato | nucleus | 56.0 | 47.8 |
| Solyc02g080720.1.1 | Tomato | nucleus | 52.57 | 28.22 |
| Bra018498.1-P | Field mustard | mitochondrion | 10.29 | 25.35 |
| Solyc02g080710.1.1 | Tomato | nucleus | 48.57 | 23.68 |
| CDY71094 | Canola | mitochondrion | 10.29 | 22.5 |
| Solyc02g080740.1.1 | Tomato | nucleus | 31.43 | 19.86 |
| Solyc02g080730.1.1 | Tomato | nucleus | 30.29 | 19.63 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 12.57 | 17.89 |
| CDX94559 | Canola | mitochondrion | 14.86 | 15.03 |
| CDX97319 | Canola | mitochondrion | 16.57 | 14.01 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 18.29 | 13.97 |
| Bra029503.1-P | Field mustard | mitochondrion | 13.71 | 13.95 |
| CDY16660 | Canola | mitochondrion | 13.71 | 13.87 |
| CDY00733 | Canola | mitochondrion, nucleus | 10.86 | 13.38 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 12.0 | 13.29 |
| AT4G04555.1 | Thale cress | mitochondrion | 8.0 | 13.21 |
| KRG99004 | Soybean | nucleus | 15.43 | 12.98 |
| AT4G04605.1 | Thale cress | mitochondrion | 16.0 | 12.73 |
| PGSC0003DMT400041071 | Potato | nucleus | 19.43 | 11.26 |
| KRH36473 | Soybean | nucleus | 17.71 | 10.95 |
| KRH11454 | Soybean | nucleus | 17.71 | 10.8 |
| PGSC0003DMT400002410 | Potato | nucleus | 12.57 | 10.19 |
| PGSC0003DMT400075668 | Potato | nucleus | 16.0 | 9.09 |
| AT4G04580.1 | Thale cress | nucleus | 8.57 | 9.04 |
| PGSC0003DMT400077217 | Potato | nucleus | 17.71 | 8.14 |
| PGSC0003DMT400026419 | Potato | nucleus | 16.0 | 8.05 |
| PGSC0003DMT400068508 | Potato | nucleus | 14.86 | 7.95 |
| PGSC0003DMT400011207 | Potato | nucleus | 10.29 | 7.59 |
| PGSC0003DMT400047532 | Potato | nucleus | 15.43 | 7.48 |
| PGSC0003DMT400030518 | Potato | nucleus | 13.14 | 7.47 |
| KRH45989 | Soybean | nucleus | 6.86 | 7.45 |
| PGSC0003DMT400038366 | Potato | nucleus | 9.71 | 6.59 |
| PGSC0003DMT400043200 | Potato | nucleus | 14.86 | 6.53 |
| PGSC0003DMT400017981 | Potato | nucleus | 13.71 | 6.37 |
| PGSC0003DMT400034663 | Potato | nucleus | 15.43 | 6.0 |
| Os12t0591600-01 | Rice | nucleus | 5.14 | 4.5 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400042402 | EnsemblPlantsGene:PGSC0003DMG400016443 | Gene3D:1.10.10.60 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | PGSC:PGSC0003DMG400016443 |
| UniParc:UPI0002963852 | UniProt:M1BCZ4 | MapMan:35.2 | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400016443]
Coordinates
chr2:-:36573577..36575534
Molecular Weight (calculated)
19515.4 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.805
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRLRWTHDL HRSFVHAVER LGGEDPVAEA ANGSKRNRMD GPDQVMYPHG SFLHHYYNDD PNSTITSNYS DQIASTPPFF PPAPWKHMPE KMMGLERRSN
101: SASNMFRDFF KGCTTVQDGS VGDQYGSSLS NKHFSMIDTE EEAEDSGSTT MSLQPSAGLD DVNNNNNISL DLTLG
101: SASNMFRDFF KGCTTVQDGS VGDQYGSSLS NKHFSMIDTE EEAEDSGSTT MSLQPSAGLD DVNNNNNISL DLTLG
001: MAGRSSPGKC STWLDLNREE TVEKNNEEES SVEDEDQITN NVRQYIRSNM PRLRWTPDLH LSFVRAVQRL GGPDRATPKL VLEMMNLKGL SIAHVKSHLQ
101: MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN
201: NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS TSSEP
101: MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN
201: NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS TSSEP
Arabidopsis Description
At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.