Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g076670.2.1 | Tomato | nucleus | 91.95 | 94.67 |
| PGSC0003DMT400011207 | Potato | nucleus | 37.36 | 54.85 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 27.01 | 38.84 |
| KRH11029 | Soybean | nucleus | 36.21 | 34.52 |
| AT2G42660.1 | Thale cress | nucleus | 24.71 | 33.73 |
| KRH21258 | Soybean | nucleus | 35.63 | 33.24 |
| KRH58975 | Soybean | nucleus | 34.2 | 29.68 |
| KRH42874 | Soybean | nucleus | 33.91 | 29.35 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 12.64 | 27.85 |
| CDY42825 | Canola | nucleus | 25.29 | 26.91 |
| CDY67147 | Canola | nucleus | 24.71 | 26.3 |
| KRH27060 | Soybean | nucleus | 27.59 | 26.09 |
| PGSC0003DMT400041071 | Potato | nucleus | 22.13 | 25.5 |
| KRH22274 | Soybean | nucleus | 26.72 | 25.2 |
| PGSC0003DMT400068508 | Potato | nucleus | 22.99 | 24.46 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 27.87 | 23.66 |
| PGSC0003DMT400075668 | Potato | nucleus | 20.4 | 23.05 |
| PGSC0003DMT400077217 | Potato | nucleus | 24.71 | 22.57 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 24.14 | 22.22 |
| GSMUA_Achr10P... | Banana | nucleus | 32.18 | 21.62 |
| PGSC0003DMT400002410 | Potato | nucleus | 12.93 | 20.83 |
| PGSC0003DMT400042480 | Potato | nucleus | 12.07 | 20.49 |
| TraesCS6D01G098200.1 | Wheat | nucleus | 27.3 | 20.0 |
| Zm00001d046174_P001 | Maize | nucleus | 30.46 | 19.96 |
| OQU76531 | Sorghum | nucleus | 29.31 | 19.92 |
| Bra000270.1-P | Field mustard | nucleus | 16.38 | 19.79 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 27.3 | 19.79 |
| TraesCS6A01G109700.1 | Wheat | nucleus | 27.01 | 19.71 |
| Os06t0543200-01 | Rice | nucleus | 30.46 | 19.52 |
| PGSC0003DMT400038366 | Potato | nucleus | 14.37 | 19.38 |
| Zm00001d037015_P001 | Maize | nucleus | 30.46 | 19.13 |
| Zm00001d016175_P001 | Maize | nucleus | 29.31 | 18.89 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 27.59 | 18.79 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 27.87 | 18.76 |
| EES04827 | Sorghum | nucleus | 28.45 | 18.64 |
| TraesCS7D01G334100.1 | Wheat | nucleus | 27.59 | 18.57 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 27.87 | 18.51 |
| PGSC0003DMT400030518 | Potato | nucleus | 16.09 | 18.18 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 27.3 | 17.99 |
| Os02t0241200-00 | Rice | nucleus | 26.15 | 16.7 |
| PGSC0003DMT400047532 | Potato | nucleus | 16.95 | 16.34 |
| PGSC0003DMT400042402 | Potato | nucleus | 8.05 | 16.0 |
| PGSC0003DMT400017981 | Potato | nucleus | 15.8 | 14.59 |
| PGSC0003DMT400043200 | Potato | nucleus | 16.09 | 14.07 |
| PGSC0003DMT400034663 | Potato | nucleus | 16.67 | 12.89 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102585011 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1AN52 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400010194 | PGSC:PGSC0003DMG400010194 | EnsemblPlants:PGSC0003DMT400026419 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF43 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000294CAC7 | RefSeq:XP_006362389.1 | SEG:seg |
Description
MYB transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400010194]
Coordinates
chr2:+:32034996..32039194
Molecular Weight (calculated)
40692.1 Da
IEP (calculated)
9.491
GRAVY (calculated)
-0.955
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENNSVEYI MEKASSSSID LNEDNKGELE EEEEVIEVED SSEKEIEGNY NTSSDVEKKN VRQYVRSKFP RLRWTPDLHR SFVHAIERLG GQERATPKLV
101: LQMMNVRGLS IAHVKSHLQM YRSKKLDESG QVLGRGNNRS MQGRSYFFRN HLGGQRYNPI QDFKMKNGAI VLARNFNYDN HALKSHSFSR PSYQAKNIFS
201: RYLPWSSDNQ GSLLNSKFQK GEDLLRMKSW QTPRQVVIEQ NGIMPIRSTQ FLEQKKFIPN QWEEKTAKNS HFLLQENLGQ PYSKWNCRNN ALDQNLVTPC
301: RIKMKEDKSG FEEKEWLPDL QLRLSRSTDD KINEKRMDQS DINTMLSL
101: LQMMNVRGLS IAHVKSHLQM YRSKKLDESG QVLGRGNNRS MQGRSYFFRN HLGGQRYNPI QDFKMKNGAI VLARNFNYDN HALKSHSFSR PSYQAKNIFS
201: RYLPWSSDNQ GSLLNSKFQK GEDLLRMKSW QTPRQVVIEQ NGIMPIRSTQ FLEQKKFIPN QWEEKTAKNS HFLLQENLGQ PYSKWNCRNN ALDQNLVTPC
301: RIKMKEDKSG FEEKEWLPDL QLRLSRSTDD KINEKRMDQS DINTMLSL
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.