Factsheet for GSMUA_Achr10P14250_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P30700_001	Banana	mitochondrion	9.65	45.87
GSMUA_Achr7P13880_001	Banana	nucleus	36.1	45.61
VIT_12s0028g02080.t01	Wine grape	nucleus	20.85	44.63
GSMUA_Achr5P00310_001	Banana	nucleus	7.72	44.44
PGSC0003DMT400011207	Potato	nucleus	16.02	35.02
KRH11029	Soybean	nucleus	24.52	34.79
KRH21258	Soybean	nucleus	24.71	34.32
GSMUA_Achr7P09370_001	Banana	nucleus	24.52	33.6
Solyc03g006150.2.1	Tomato	extracellular, nucleus	19.88	33.55
PGSC0003DMT400026419	Potato	nucleus	21.62	32.18
KRH27060	Soybean	nucleus	22.59	31.79
AT2G42660.1	Thale cress	nucleus	15.64	31.76
Solyc02g076670.2.1	Tomato	nucleus	20.66	31.66
KRH42874	Soybean	nucleus	24.32	31.34
GSMUA_AchrUn_...	Banana	nucleus	17.76	31.19
KRH58975	Soybean	nucleus	24.13	31.17
KRH22274	Soybean	nucleus	22.2	31.17
GSMUA_Achr7P22410_001	Banana	nucleus	19.5	30.42
GSMUA_Achr11P...	Banana	nucleus	13.71	30.34
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	9.65	29.59
GSMUA_Achr4P25920_001	Banana	nucleus	13.51	28.23
GSMUA_Achr1P23970_001	Banana	nucleus	10.62	26.83
CDY67147	Canola	nucleus	16.8	26.61
CDY42825	Canola	nucleus	16.8	26.61
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	11.39	26.34
GSMUA_Achr7P03510_001	Banana	nucleus	10.23	25.73
GSMUA_Achr5P19200_001	Banana	nucleus	14.09	25.52
GSMUA_Achr2P11010_001	Banana	nucleus	13.9	24.66
GSMUA_Achr11P...	Banana	nucleus	11.2	24.47
GSMUA_Achr10P...	Banana	nucleus	13.13	24.46
GSMUA_Achr9P23320_001	Banana	nucleus	10.23	23.45
GSMUA_Achr4P32400_001	Banana	plastid	11.2	23.11
GSMUA_Achr2P18070_001	Banana	nucleus	11.78	22.68
GSMUA_Achr10P...	Banana	nucleus	9.07	22.49
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	11.78	22.43
GSMUA_Achr1P22100_001	Banana	nucleus	9.27	21.92
GSMUA_AchrUn_...	Banana	nucleus	13.51	21.54
GSMUA_Achr3P00380_001	Banana	nucleus	10.81	21.37
Bra000270.1-P	Field mustard	nucleus	11.78	21.18
GSMUA_Achr2P13320_001	Banana	nucleus, plastid	11.2	21.01
GSMUA_AchrUn_...	Banana	nucleus	11.58	19.17
GSMUA_Achr8P30770_001	Banana	nucleus	12.93	18.87
GSMUA_Achr7P02420_001	Banana	nucleus	12.55	18.36
GSMUA_AchrUn_...	Banana	nucleus	11.97	18.13
GSMUA_Achr8P22900_001	Banana	nucleus	12.74	17.51
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	13.71	17.19
GSMUA_AchrUn_...	Banana	nucleus	12.36	16.16
GSMUA_Achr4P04510_001	Banana	nucleus	11.58	16.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G14250_001
EnsemblPlants:GSMUA_Achr10P14250_001	EnsemblPlants:GSMUA_Achr10T14250_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0RI51	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF42	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000294EA87	SEG:seg	:	:

Description

MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G14250_001]

Coordinates

chr10:+:22588529..22590918

Molecular Weight (calculated)

57851.4 Da

IEP (calculated)

6.472

GRAVY (calculated)

-0.827

Length

518 amino acids

Sequence
(BLAST)

001: MGEEKDKEVV GGHEDDERSV GSSRSPSQKR PLEVLDLNED VTIDSSEGEE EEEEEVAEDG DDDGDGGSST EVARGGSSSN NSSTDNNFNN KSGDTTEGSS
101: GRAPTVRQYV RSKLPRLRWT PDLHLAFVHA VERLGGQERA TPKLVLQLMN VRGLSIAHVK SHLQMYRSKK LDGSGQEKSA ISSVMTPMDL HLKEHRLHEM
201: FYRRTDSFQP FRLDNGGFFS SRSIHEPDQF CNAFFHGSQF LKASVLRSSN FGHREWEFNR QAAAWDSCLR DQGPSKGLIH DMIFSQKRKP STSHLFDVRD
301: AISGNGNPRT VHQFLEGRRW SPADMIEARK WEGNRTGNFG SSGYPLAKAV PADPVSGNTL FGWKGNSNIC IDTMQSNSHV PIVVNDELPP NSQQPFQVDE
401: SRRRQDKPLR NSEDMHAKTE TPMKDAKKMR MATTTKDLTP DLQLSLRSSL INDGGYEKKS LETEQVNSML SLSLSPSTSM QREKHMKAEM QFLEIGSSKK
501: AVLGLSTLDL TMSIRASE

Best Arabidopsis Sequence Match ( AT2G38300.1 )
(BLAST)

001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL

Arabidopsis Description

Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.