Factsheet for GSMUA_Achr2P13320_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	55.07	67.86
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	27.17	44.38
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	42.39	43.01
GSMUA_Achr4P32400_001	Banana	plastid	37.32	41.04
GSMUA_Achr11P...	Banana	nucleus	31.88	37.13
GSMUA_Achr5P00310_001	Banana	nucleus	11.96	36.67
GSMUA_Achr1P23970_001	Banana	nucleus	27.17	36.59
GSMUA_Achr2P18070_001	Banana	nucleus	35.14	36.06
GSMUA_Achr9P23320_001	Banana	nucleus	28.62	34.96
GSMUA_Achr10P...	Banana	nucleus	26.45	34.93
GSMUA_Achr9P30700_001	Banana	mitochondrion	13.77	34.86
GSMUA_Achr1P22100_001	Banana	nucleus	26.45	33.33
GSMUA_Achr3P00380_001	Banana	nucleus	31.52	33.21
GSMUA_Achr10P...	Banana	nucleus	32.97	32.73
GSMUA_AchrUn_...	Banana	nucleus	36.96	29.82
GSMUA_AchrUn_...	Banana	nucleus	33.33	28.31
GSMUA_AchrUn_...	Banana	nucleus	31.88	28.11
GSMUA_Achr7P02420_001	Banana	nucleus	35.87	27.97
GSMUA_Achr8P30770_001	Banana	nucleus	34.06	26.48
GSMUA_Achr8P22900_001	Banana	nucleus	35.87	26.26
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	39.13	26.15
GSMUA_Achr4P04510_001	Banana	nucleus	34.78	25.6
GSMUA_AchrUn_...	Banana	nucleus	36.23	25.25
GSMUA_Achr7P03510_001	Banana	nucleus	14.86	19.9
GSMUA_Achr11P...	Banana	nucleus	16.3	19.23
GSMUA_Achr5P19200_001	Banana	nucleus	17.03	16.43
GSMUA_Achr4P25920_001	Banana	nucleus	14.49	16.13
GSMUA_AchrUn_...	Banana	nucleus	17.03	15.93
GSMUA_Achr7P22410_001	Banana	nucleus	18.48	15.36
GSMUA_Achr2P11010_001	Banana	nucleus	15.94	15.07
GSMUA_Achr7P09370_001	Banana	nucleus	18.48	13.49
GSMUA_Achr7P13880_001	Banana	nucleus	18.84	12.68
GSMUA_Achr10P...	Banana	nucleus	21.01	11.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G13320_001
EnsemblPlants:GSMUA_Achr2P13320_001	EnsemblPlants:GSMUA_Achr2T13320_001	InterPro:Homeobox-like_sf	UniProt:M0S7M3	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF12	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000294F773
SEG:seg	:	:	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G13320_001]

Coordinates

chr2:-:15506165..15509034

Molecular Weight (calculated)

30455.1 Da

IEP (calculated)

7.898

GRAVY (calculated)

-0.524

Length

276 amino acids

Sequence
(BLAST)

001: MATVFPDLSL HISPPSISTG HAEPTLSLGL QAPASSLTNH HDCHHHHHLH HPQIYGFKRN PRPARGKKSL RAPRMRWTTT LHAHFVHAVE LLGGHERATP
101: KSVLELMNVK DLTLAHVKSH LQMYRTVKST DRGAAAQGQA DMGFSQRTGL EEVEGDVPSG KAGDDITPCY DFPITPTPAT PLPKSSRELH PSTAGSGWNP
201: SNKQNSSSYL YFRNDNLLSN DNQVLGQDHL LTQSQVVVPN VELISMPTAH TDLRAFSKLP DLEITLGRHG WQMECL

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.