Factsheet for GSMUA_AchrUn_randomP15160_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	28.62	55.03
GSMUA_Achr1P22100_001	Banana	nucleus	32.92	48.86
GSMUA_Achr1P23970_001	Banana	nucleus	28.92	45.85
GSMUA_Achr8P30770_001	Banana	nucleus	48.92	44.79
GSMUA_Achr2P18070_001	Banana	nucleus	35.38	42.75
GSMUA_Achr11P...	Banana	nucleus	31.08	42.62
GSMUA_Achr5P00310_001	Banana	nucleus	11.69	42.22
GSMUA_Achr9P23320_001	Banana	nucleus	28.62	41.15
GSMUA_Achr10P...	Banana	nucleus	35.08	41.01
GSMUA_Achr9P30700_001	Banana	mitochondrion	12.92	38.53
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	26.46	38.39
KRH74367	Soybean	nucleus	32.0	37.68
GSMUA_Achr3P00380_001	Banana	nucleus	30.15	37.4
GSMUA_Achr7P02420_001	Banana	nucleus	40.31	37.01
CDX84102	Canola	nucleus	30.46	36.53
GSMUA_Achr8P22900_001	Banana	nucleus	40.92	35.28
VIT_16s0039g01900.t01	Wine grape	nucleus	34.15	34.37
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	28.62	34.19
PGSC0003DMT400034663	Potato	nucleus	46.77	33.78
GSMUA_AchrUn_...	Banana	nucleus	32.31	33.55
Bra023254.1-P	Field mustard	nucleus	37.54	33.33
GSMUA_Achr2P13320_001	Banana	nucleus, plastid	28.31	33.33
GSMUA_Achr10P...	Banana	nucleus	21.23	33.01
KRG97985	Soybean	nucleus	47.69	32.56
Solyc11g011770.1.1	Tomato	nucleus	45.85	32.25
AT1G32240.1	Thale cress	nucleus	37.85	31.7
GSMUA_AchrUn_...	Banana	nucleus	32.92	31.29
GSMUA_Achr4P32400_001	Banana	plastid	24.0	31.08
KRH39575	Soybean	nucleus	37.23	31.03
Bra033844.1-P	Field mustard	nucleus	37.23	30.87
KRH30907	Soybean	nucleus	47.08	30.3
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	32.0	29.3
TraesCS6B01G293700.1	Wheat	nucleus	31.69	29.01
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	36.62	28.81
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	31.38	28.57
GSMUA_Achr4P04510_001	Banana	nucleus	32.62	28.27
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	31.69	27.84
GSMUA_AchrUn_...	Banana	nucleus	33.54	27.53
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	31.38	27.2
Zm00001d017702_P001	Maize	peroxisome	31.38	26.84
Os02t0696900-00	Rice	plasma membrane	28.0	24.66
GSMUA_Achr7P03510_001	Banana	nucleus	12.92	20.39
GSMUA_Achr11P...	Banana	nucleus	14.15	19.66
GSMUA_Achr5P19200_001	Banana	nucleus	16.0	18.18
GSMUA_Achr4P25920_001	Banana	nucleus	13.54	17.74
GSMUA_AchrUn_...	Banana	nucleus	16.0	17.63
GSMUA_Achr7P22410_001	Banana	nucleus	17.85	17.47
GSMUA_Achr2P11010_001	Banana	nucleus	14.77	16.44
GSMUA_Achr7P13880_001	Banana	nucleus	18.15	14.39
GSMUA_Achr7P09370_001	Banana	nucleus	16.31	14.02
GSMUA_Achr10P...	Banana	nucleus	21.54	13.51

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG15160_001
EnsemblPlants:GSMUA_AchrUn_randomP15160_001	EnsemblPlants:GSMUA_AchrUn_randomT15160_001	InterPro:Homeobox-like_sf	UniProt:M0U9C5	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00029523B0	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15160_001]

Coordinates

chrchrUn_random:+:71498132..71501731

Molecular Weight (calculated)

35524.4 Da

IEP (calculated)

7.187

GRAVY (calculated)

-0.595

Length

325 amino acids

Sequence
(BLAST)

001: MSLQEIVSET NPTASPDLSL HIGPPCVVPS SLSNADSVSR VSSEANIHQR FRGPPPQVND DRNPKSGLVQ QGFSSFLSSS SSSSNGYSNN VYLMGSYLQP
101: PNGSQPSVSS YQWTPQLPPP TWIAGLYRHL PCGVGSLSRS GFMPRYPTKR STRAPRMRWT SSLHARFVHA VELLGGHERA TPKSILELMD VKDLTLAHVK
201: SHLQMYRTIK STDKPAASSG QSDGSGEEDL VPGDGHLPIM DHKVSDAPKQ VHPLDSDIGW INSSSRQEWM QINSNGINSA VLRSTSLSSQ IEDGYCRSSS
301: TDDSCQEHQI PSLEFTLGRS DWHSK

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.